Detail information of GWHGAAEX005517/evm.TU.scaffold_165.31


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|14520577|ref|NP_126052.1|2.00E-18hypothetical protein PAB0240 [Pyrococcus abyssi GE5]
nrgi|697128992|ref|XP_009618552.1|0PREDICTED: plastidal glycolate/glycerate translocator 1, chloroplastic [Nicotiana tomentosiformis]
Swissprottr|Q9FVQ4|PLGG1_ARATH0Plastidal glycolate/glycerate translocator 1, chloroplastic (Precursor)
trEMBLtr|K4CMZ2|K4CMZ2_SOLLC0Uncharacterized protein {ECO:0000313|EnsemblPlants:Solyc08g076290.2.1}
TAIRAT1G320800membrane protein, putative

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000167965984978139-
Transcript Sequence

Network for GWHGAAEX005517

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04172.15LrgB2614841.30E-43
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms14.400
SRR2545915Juvenile tuber13.580
SRP108465SRR5643513five period of Gastrodia elata12.490
SRR5643514five period of Gastrodia elata12.640
SRR5643515five period of Gastrodia elata13.500
SRR5643524five period of Gastrodia elata11.710
SRR5643525five period of Gastrodia elata21.280
SRR5643528five period of Gastrodia elata24.680
SRR5643658five period of Gastrodia elata28.080
SRR5643659five period of Gastrodia elata11.830
SRR5643660five period of Gastrodia elata11.120
SRR5643661five period of Gastrodia elata12.340
SRR5643662five period of Gastrodia elata9.660
SRR5643663five period of Gastrodia elata12.890
SRR5643664five period of Gastrodia elata10.830
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_116.690
SRR6049655Rhizomagastrodiae_C368-T10_good_114.420
SRR6049656Rhizomagastrodiae_C368-T07_good_113.500
SRR6049657Rhizomagastrodiae_C368-T07_good_115.760
SRR6049658Rhizomagastrodiae_C368-T04_good_125.290
SRR6049659Rhizomagastrodiae_C368-T04_good_125.140
SRR6049660Rhizomagastrodiae_C368-T01_good_116.900
SRR6049661Rhizomagastrodiae_C368-T04_good_122.430
SRR6049662Rhizomagastrodiae_C368-T01_good_111.870
SRR6049663Rhizomagastrodiae_C368-T01_good_114.930
SRR6049664Rhizomagastrodiae_C368-T10_good_113.140
SRR6049665Rhizomagastrodiae_C368-T10_good_113.140
SRP279888GastroGastrodia elata tuber 15.20
JuvenJuvenile tuber13.72
Mother_GastroMother tuber of Gastrodia elata 31.50
Mother_JuvenMother tuber of Juvenile 14.96