Detail information of GWHGAAEX005518/evm.TU.scaffold_165.32


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|695055805|ref|XP_009416100.1|4.35E-64PREDICTED: probable WRKY transcription factor 35 isoform X2 [Musa acuminata subsp. malaccensis]
Swissprottr|O64747|WRK35_ARATH5.00E-59Probable WRKY transcription factor 35
trEMBLtr|F6HM19|F6HM19_VITVI7.00E-64Putative uncharacterized protein {ECO:0000313|EMBL:CCB55894.1}
TAIRAT2G348302.00E-58WRKY DNA-binding protein 35

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000016710805381100782+
Transcript Sequence

Network for GWHGAAEX005518

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03106.14WRKY761331.30E-26
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyWRKY

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms42.940
SRR2545915Juvenile tuber57.260
SRP108465SRR5643513five period of Gastrodia elata65.890
SRR5643514five period of Gastrodia elata61.930
SRR5643515five period of Gastrodia elata44.220
SRR5643524five period of Gastrodia elata66.660
SRR5643525five period of Gastrodia elata43.840
SRR5643528five period of Gastrodia elata20.200
SRR5643658five period of Gastrodia elata37.510
SRR5643659five period of Gastrodia elata15.980
SRR5643660five period of Gastrodia elata12.640
SRR5643661five period of Gastrodia elata21.500
SRR5643662five period of Gastrodia elata17.240
SRR5643663five period of Gastrodia elata17.010
SRR5643664five period of Gastrodia elata17.430
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_143.930
SRR6049655Rhizomagastrodiae_C368-T10_good_176.930
SRR6049656Rhizomagastrodiae_C368-T07_good_158.570
SRR6049657Rhizomagastrodiae_C368-T07_good_138.840
SRR6049658Rhizomagastrodiae_C368-T04_good_147.380
SRR6049659Rhizomagastrodiae_C368-T04_good_154.390
SRR6049660Rhizomagastrodiae_C368-T01_good_140.230
SRR6049661Rhizomagastrodiae_C368-T04_good_151.120
SRR6049662Rhizomagastrodiae_C368-T01_good_152.490
SRR6049663Rhizomagastrodiae_C368-T01_good_159.030
SRR6049664Rhizomagastrodiae_C368-T10_good_167.980
SRR6049665Rhizomagastrodiae_C368-T10_good_167.980
SRP279888GastroGastrodia elata tuber 29.89
JuvenJuvenile tuber52.19
Mother_GastroMother tuber of Gastrodia elata 221.89
Mother_JuvenMother tuber of Juvenile 121.80