Detail information of GWHGAAEX005519/evm.TU.scaffold_165.33


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG31065.00E-64ER lumen protein retaining receptor
nrgi|743779174|ref|XP_010920052.1|1.14E-82PREDICTED: ER lumen protein-retaining receptor-like [Elaeis guineensis]
Swissprottr|Q8VWI1|ERD2B_ARATH6.00E-71ER lumen protein-retaining receptor B
trEMBLtr|V4VTD5|V4VTD5_9ROSI2.00E-78ER lumen protein-retaining receptor {ECO:0000256|RuleBase:RU000634}
TAIRAT1G293305.00E-64ER lumen protein retaining receptor family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000016710828481157995-
Transcript Sequence

Network for GWHGAAEX005519

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00810.17ER_lumen_recept471715.50E-40
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName
GO:0006621Biological Processprotein retention in ER lumen
GO:0046923Molecular FunctionER retention sequence binding
GO:0016021Cellular Componentintegral component of membrane

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms12.260
SRR2545915Juvenile tuber15.070
SRP108465SRR5643513five period of Gastrodia elata11.280
SRR5643514five period of Gastrodia elata14.400
SRR5643515five period of Gastrodia elata12.440
SRR5643524five period of Gastrodia elata12.670
SRR5643525five period of Gastrodia elata8.540
SRR5643528five period of Gastrodia elata12.630
SRR5643658five period of Gastrodia elata7.160
SRR5643659five period of Gastrodia elata10.480
SRR5643660five period of Gastrodia elata11.250
SRR5643661five period of Gastrodia elata13.090
SRR5643662five period of Gastrodia elata9.630
SRR5643663five period of Gastrodia elata11.160
SRR5643664five period of Gastrodia elata9.900
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_16.170
SRR6049655Rhizomagastrodiae_C368-T10_good_16.970
SRR6049656Rhizomagastrodiae_C368-T07_good_19.110
SRR6049657Rhizomagastrodiae_C368-T07_good_18.690
SRR6049658Rhizomagastrodiae_C368-T04_good_15.180
SRR6049659Rhizomagastrodiae_C368-T04_good_15.100
SRR6049660Rhizomagastrodiae_C368-T01_good_14.830
SRR6049661Rhizomagastrodiae_C368-T04_good_14.350
SRR6049662Rhizomagastrodiae_C368-T01_good_18.610
SRR6049663Rhizomagastrodiae_C368-T01_good_16.900
SRR6049664Rhizomagastrodiae_C368-T10_good_111.720
SRR6049665Rhizomagastrodiae_C368-T10_good_111.720
SRP279888GastroGastrodia elata tuber 8.02
JuvenJuvenile tuber3.75
Mother_GastroMother tuber of Gastrodia elata 5.80
Mother_JuvenMother tuber of Juvenile 5.17