Gene detail

Detail information of GWHGAAEX005531/evm.TU.scaffold_165.47

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|743852751\|ref\|XP_010940465.1\|	0	PREDICTED: multiple C2 and transmembrane domain-containing protein 2-like [Elaeis guineensis]
Swissprot	tr\|Q9ZVT9\|C2GR1_ARATH	2.00E-15	C2 and GRAM domain-containing protein At1g03370
trEMBL	tr\|F6HUD2\|F6HUD2_VITVI	0	Putative uncharacterized protein {ECO:0000313\|EMBL:CCB58355.1}
TAIR	AT4G11610	0	C2 calcium/lipid-binding plant phosphoribosyltransferase family protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000167	1697970	1721308	+

Transcript Sequence
>GWHTAAEX005531 CTCTCTCTCTCTCTCTCTTTTGCACTCTTTGGGTTTGGGTTAGGGTTCACTTTTCTTTTCCTATATTTGAATACTGAGCGAAAGCCGCATTGCAAATGAGCTATGAAGGCTTATGCTCTTCATTGAGGATTGAAAGTGGTAAGGGAGCTTGAGCTGTTTCCAGCTCGGATCTGAGGTTTAGATCCTGAAGGAGATGGTCTTCGCACTAAAATCTTTCGTTTAACAGTTTGTGTGGCTTTGAATGTTCGAAGAACCTCGGAAAGTGGTAGTAGGTGCGGTAATATGCATTGCGCAAGCTGGGATCTGGCATTAACGTGAGTTAGTTTCACATTCTCTTCTTCCAAAAATATTGGATTTGTAGGATTTGATGCTTTTCTGCCATTTATTTATGTGTTTGAGATGGAGGGACTTGAACAAATTACTAATTATTTCATAATGCTGAATGAGCGAGTGCATGGATACGGCACATCTACTTACTAAAAAACTACCTCTAAAAATATTTTTGTTGACTCCATTATTACTGTTGAGAAGATTATTAGTAGACATGAGTAATCTCAAGCTAGGTGTGGAGGTTGTGAGTGCTCATGATCTAAAAATCCCCAAGGATGCACACGGATCAGCTAATGCCTGCGTCGAGGTTCATTTTGATGGCCAGAAATTTCGAACCTCAGTCAAGGAGAAGGACCTCAATCCTGTCTGGAACGAGCGCTTTTATTTCAACATTTCTGACCCTTCTAATCTGCCGAACCTGACTCTCGAGGCCTCTATCTACAACATAAATTCGGTCACTAATTCAAAGTCCTTTCTAGGCAAAGTCCAGCTTGCCGGAACTTCTTTTGTTTCCTACTCCGATGCTGTGGTTCAACACTATCCCCTCGAGAAACGTGACCTTTTTTCACGGGTTAAAGGCGAGATTGGACTTAAGGTGTTCCTTACGGATGATCCCTCAATGAAAACTTCCAGCCCCATCTCTGAAACTACTGACCTTTCTCAGCATGCTCAGATCCAATTTTCAAACTCAACTTCGTATATCCATCCAGAAAGCAAGCCCGCCTTCCGCAGCATCCCTAAAGATGATCACATACCCCACCAGTTCAATTCTTCAGCTCCTATCGGTGTTCAGCCGAAATTTATAATTGATGAGATGAAGCCTGAACCCCCCCCACCCAGAATAGTAAGAATGTATTCGTCGGCAGCATCAGCACAACCTGTTGACTATGCACTTAAGGAAACGAGCCCTATTCTCGGCGGTGGACAGATTGTTCATGGACGGGTAATTCGTGCTGAGAAGCCAGCCAGCACTTACGACCTTGTGGAGAAGATGCAGTACCTCTTTGTAAGGGTGGTAAAAGCGAGAGATTTGCCTGCCATGGATTTAACCGGGAGCTTGGACCCTTACGTTGAGGTGAGGGTTGGGAATTATAAGGGGGTCACCAAGCATTTTGAGAAGAAGCAAAACCCCGAATGGAATGACGTATTCGCATTTGCAAGGGATCGAATGCCGGCATCAATCCTCGAAGTCGTTGTTAAAGACAAAGATGCAGTCAAGGATGACTTTGTTGGGCTGGTTCGCTTTGATTTGAATGACATCCCTATGCGGGTTCCACCGGATAGTCCTTTGGCTCCAGAGTGGTACCGTTTGGAGGATAAGAAGGGCGGAAAGACGAAGGGCGAGCTGATGCTCGCGGTCTGGATGGGCACCCAAGCTGATGAGGCGTTTCCGGATGCGTGGCACTCGGATGCGGCTGTTCCTATCGACGCAACCGCTATAAGTTCTCATATTCATTCCAAGGTTTACCATGCACCAAGGCTGTGGTATGTTCGCCTCAATGTCATAGAGGCGCAAGATATAATTCCATCCGACAAGTCCCGTTTCCCCGATGTTTACGTCAAGGTGCAGCTTGGGAATCAGTTTTTGAAAACTAGAACCGTTCAGGCGCGGACATTGAACCCTCTTTGGAACGAAGACTTATTATTCGTTGCTGCTGAGCCGTTTGAGGATCATCTGATTGTGTCTGTAGAGGACCGTGTGGGCCCCAACAAAGACGAAATCGTTGGGCGTATCATCATACCATTGACATCCATTGAAAAACGAGCTGATGACCGCACTATCAACACGCGGTGGTTCAATCTCGAGAAGCCAGGTGCAGCTGGCGATGCAGACCAAGTCAAAAAAGATAAGTTTGCAAGTCGTATTCACGTCAGAGTTTGCCTCGATGGCGGTTATCATGTGCTTGACGAGTCAACCCATTATAGCAGCGATCTGAGGCCCACGGCGAAGCAGCTTTGGAAGCCCTCCATAGGGTTGCTCGAGCTCGGCATCCTCAGTGCTGAGGGACTTCACCCAATGAAAACACGGGATGGCAAAGGAACTTCAGACACTTACTGTGTCGCCAAATATGGACAGAAATGGGTTCGCACCCGCACCATCATCACTAGCCTCAGTCCAAAGTACAATGAGCAGTACACTTGGGAGGTTTATGATCCTGCTACAGTCCTAACGGTCGGTGTGTTTGACAACTGCCAGCTCGGGGAGAAGAACCCAAATAATAATAATAACAGGGATGCGAAGATAGGGAAGGTGCGCATCCGTCTCTCAACGCTAGAAACTGGACGAGTGTACACTCACTCGTACCCGCTTCTAGTTCTCCACCCATCCGGCCTCAAGAAGATGGGAGAGCTTCACCTTGCGATACGATTTTCATCAACATCGTTGATCAACATGCTGTCGTTGTACACGCGCCCTTTGCTCCCTAAGATGCATTACATTCGTCCGCTAACTGTTATGCAGCTCGACATGCTACGCCATCAGGCTGTCCAGATTGTGGCAGCGAGACTGAGCAGGATGGAGCCGCCTCTCCGGAAGGAAGTCGTCGAGTACATGTCGGATGTCGACTCACACTTGTGGTGTATGCGTCGGAGCAAAGCGAACTTCTTCCGGTTCATGTCCGTGTTCTCAGGATTGTTCGCGGCAGGCAAATGGTTCGGAGACATCTGCTCTTGGAAGAACCCCATCACAACCGTCCTCGTTCACATCCTCTTCGTCATGCTCGTCTGCTTTCCAGACCTGATACTTCCGACCATCTTCCTCTACATGTTCTTGATCGGGGTCTGGAATTACCGACATCGGCCTCGCTACCCGCCGCACATGAACACGAAGATCTCGCACGCCGAGGCGGTGCACCCTGACGAGCTCGACGAGGAGTTCGACTCGTTCCCTACGTCTCGTAGCCCGGAGCTTGTGAGGATGAGGTACGACCGTCTGAGGAGCGTGGCCGGGAGGATTCAGACGGTTGTTGGTGATATCGCAACGCAGGGGGAGCGAATTCAGGCCCTCCTCAGCTGGAGGGACCCACGCGCCACCGCCATTTTCGTCCTGTTCTGCCTGATTTTGGCCGTGGTCCTGTATGTGACTCCATTCCAGGTTTTGTCAGCTCTGGCTGGATTTTATCTAATGAGGCACCCGAGGTTCCGGCAGAGGATGCCTGCAGCCCCGCTCAACTTTTTCAGGCGGCTTCCGGCAAGAACTGACAGCATGCTGTAAAGTGGTGGCTGAAAGGTTTTGCTCAAGTCTCAGTATTTTGTTTTCTTTTATATGCATATTTATATATTGATGGTTAGTTATGGTTGTAGTTATGCTGAGAGGAGTTGGCAGTAGATGATGGAAACTACAAGGATTATGTTATCTTATAGAATCTTATGTTGCAAAGATTAACTTGCTTTGAAGTCTTATGAATGTGAACCGGAGTAGTGGAGCCGAGTTGCAAAGATTAACTTGCTTTTGTTATTTTCATATATCTGACGTCTGAATTTTGATATGTTTTGAAGAGTATTGTTATACTTACATATTAATATATATCAAAATATATAG

Network for GWHGAAEX005531

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00168.29	C2	39	131	2.10E-16
PF00168.29	C2	296	388	7.60E-20
PF00168.29	C2	458	564	5.30E-21
PF00168.29	C2	622	733	4.10E-23
PF08372.9	PRT_C	878	1033	3.20E-81

Protein Sequence

>GWHPAAEX005531
MSECMDTAHLLTKKLPLKIFLLTPLLLLRRLLVDMSNLKLGVEVVSAHDLKIPKDAHGSANACVEVHFDGQKFRTSVKEKDLNPVWNERFYFNISDPSNLPNLTLEASIYNINSVTNSKSFLGKVQLAGTSFVSYSDAVVQHYPLEKRDLFSRVKGEIGLKVFLTDDPSMKTSSPISETTDLSQHAQIQFSNSTSYIHPESKPAFRSIPKDDHIPHQFNSSAPIGVQPKFIIDEMKPEPPPPRIVRMYSSAASAQPVDYALKETSPILGGGQIVHGRVIRAEKPASTYDLVEKMQYLFVRVVKARDLPAMDLTGSLDPYVEVRVGNYKGVTKHFEKKQNPEWNDVFAFARDRMPASILEVVVKDKDAVKDDFVGLVRFDLNDIPMRVPPDSPLAPEWYRLEDKKGGKTKGELMLAVWMGTQADEAFPDAWHSDAAVPIDATAISSHIHSKVYHAPRLWYVRLNVIEAQDIIPSDKSRFPDVYVKVQLGNQFLKTRTVQARTLNPLWNEDLLFVAAEPFEDHLIVSVEDRVGPNKDEIVGRIIIPLTSIEKRADDRTINTRWFNLEKPGAAGDADQVKKDKFASRIHVRVCLDGGYHVLDESTHYSSDLRPTAKQLWKPSIGLLELGILSAEGLHPMKTRDGKGTSDTYCVAKYGQKWVRTRTIITSLSPKYNEQYTWEVYDPATVLTVGVFDNCQLGEKNPNNNNNRDAKIGKVRIRLSTLETGRVYTHSYPLLVLHPSGLKKMGELHLAIRFSSTSLINMLSLYTRPLLPKMHYIRPLTVMQLDMLRHQAVQIVAARLSRMEPPLRKEVVEYMSDVDSHLWCMRRSKANFFRFMSVFSGLFAAGKWFGDICSWKNPITTVLVHILFVMLVCFPDLILPTIFLYMFLIGVWNYRHRPRYPPHMNTKISHAEAVHPDELDEEFDSFPTSRSPELVRMRYDRLRSVAGRIQTVVGDIATQGERIQALLSWRDPRATAIFVLFCLILAVVLYVTPFQVLSALAGFYLMRHPRFRQRMPAAPLNFFRRLPARTDSML

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	22.830
SRP064423	SRR2545915	Juvenile tuber	22.300
SRP108465	SRR5643513	five period of Gastrodia elata	26.210
	SRR5643514	five period of Gastrodia elata	22.580
	SRR5643515	five period of Gastrodia elata	23.930
	SRR5643524	five period of Gastrodia elata	21.040
	SRR5643525	five period of Gastrodia elata	38.680
	SRR5643528	five period of Gastrodia elata	33.850
	SRR5643658	five period of Gastrodia elata	31.420
	SRR5643659	five period of Gastrodia elata	34.460
	SRR5643660	five period of Gastrodia elata	32.900
	SRR5643661	five period of Gastrodia elata	35.240
	SRR5643662	five period of Gastrodia elata	34.990
	SRR5643663	five period of Gastrodia elata	37.180
	SRR5643664	five period of Gastrodia elata	31.670
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	23.080
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	25.870
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	23.920
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	22.880
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	19.990
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	18.450
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	20.550
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	23.960
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	31.420
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	24.270
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	25.130
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	25.130
SRP279888	Gastro	Gastrodia elata tuber	29.50
	Juven	Juvenile tuber	29.70
	Mother_Gastro	Mother tuber of Gastrodia elata	27.66
	Mother_Juven	Mother tuber of Juvenile	28.45