Detail information of GWHGAAEX005532/evm.TU.scaffold_165.48
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|291612754|ref|YP_003522911.1| | 5.00E-07 | serine/threonine protein kinase [Sideroxydans lithotrophicus ES-1] |
| nr | gi|743852768|ref|XP_010940470.1| | 0 | PREDICTED: probable serine/threonine-protein kinase At5g41260 isoform X1 [Elaeis guineensis] |
| Swissprot | tr|Q9FHD7|Y5126_ARATH | 0 | Probable serine/threonine-protein kinase At5g41260 |
| trEMBL | tr|M0S032|M0S032_MUSAM | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr1P15240_001} |
| TAIR | AT5G59010 | 0 | Protein kinase protein with tetratricopeptide repeat domain |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000167 | 1722614 | 1758286 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX005532
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF07714.16 | Pkinase_Tyr | 72 | 307 | 2.20E-23 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | RLK-Pelle_RLCK-XII-1 |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K14500 | BSK | Plant hormone signal transduction | map04075 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006468 | Biological Process | protein phosphorylation |
| GO:0005524 | Molecular Function | ATP binding |
| GO:0005515 | Molecular Function | protein binding |
| GO:0004672 | Molecular Function | protein kinase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 40.560 |
| SRR2545915 | Juvenile tuber | 41.910 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 31.540 |
| SRR5643514 | five period of Gastrodia elata | 31.310 | |
| SRR5643515 | five period of Gastrodia elata | 31.180 | |
| SRR5643524 | five period of Gastrodia elata | 29.860 | |
| SRR5643525 | five period of Gastrodia elata | 23.760 | |
| SRR5643528 | five period of Gastrodia elata | 32.170 | |
| SRR5643658 | five period of Gastrodia elata | 32.760 | |
| SRR5643659 | five period of Gastrodia elata | 29.460 | |
| SRR5643660 | five period of Gastrodia elata | 25.150 | |
| SRR5643661 | five period of Gastrodia elata | 17.380 | |
| SRR5643662 | five period of Gastrodia elata | 20.710 | |
| SRR5643663 | five period of Gastrodia elata | 22.780 | |
| SRR5643664 | five period of Gastrodia elata | 22.290 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 37.880 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 28.900 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 39.540 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 42.850 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 52.550 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 59.250 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 44.420 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 51.990 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 38.740 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 44.530 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 42.590 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 42.590 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 29.06 |
| Juven | Juvenile tuber | 38.12 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 44.32 | |
| Mother_Juven | Mother tuber of Juvenile | 39.78 |