Detail information of GWHGAAEX005536/evm.TU.scaffold_165.52


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743831816|ref|XP_010934808.1|3.98E-98PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC105054875 [Elaeis guineensis]
trEMBLtr|M0T085|M0T085_MUSAM6.00E-65Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr5P20560_001}
TAIRAT4G004407.00E-16Protein of unknown function (DUF3741)

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000016719451641959684-
Transcript Sequence

Network for GWHGAAEX005536

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF12552.7DUF37412402834.20E-12
PF14309.5DUF43787298432.00E-12
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms13.740
SRR2545915Juvenile tuber12.400
SRP108465SRR5643513five period of Gastrodia elata11.780
SRR5643514five period of Gastrodia elata8.860
SRR5643515five period of Gastrodia elata10.710
SRR5643524five period of Gastrodia elata7.910
SRR5643525five period of Gastrodia elata16.660
SRR5643528five period of Gastrodia elata17.830
SRR5643658five period of Gastrodia elata16.000
SRR5643659five period of Gastrodia elata4.790
SRR5643660five period of Gastrodia elata4.660
SRR5643661five period of Gastrodia elata4.110
SRR5643662five period of Gastrodia elata6.120
SRR5643663five period of Gastrodia elata5.700
SRR5643664five period of Gastrodia elata5.930
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_116.720
SRR6049655Rhizomagastrodiae_C368-T10_good_127.870
SRR6049656Rhizomagastrodiae_C368-T07_good_116.330
SRR6049657Rhizomagastrodiae_C368-T07_good_115.660
SRR6049658Rhizomagastrodiae_C368-T04_good_120.360
SRR6049659Rhizomagastrodiae_C368-T04_good_126.050
SRR6049660Rhizomagastrodiae_C368-T01_good_115.610
SRR6049661Rhizomagastrodiae_C368-T04_good_117.340
SRR6049662Rhizomagastrodiae_C368-T01_good_19.810
SRR6049663Rhizomagastrodiae_C368-T01_good_112.290
SRR6049664Rhizomagastrodiae_C368-T10_good_121.800
SRR6049665Rhizomagastrodiae_C368-T10_good_121.800
SRP279888GastroGastrodia elata tuber 7.16
JuvenJuvenile tuber8.39
Mother_GastroMother tuber of Gastrodia elata 10.39
Mother_JuvenMother tuber of Juvenile 12.59