Detail information of GWHGAAEX005537/evm.TU.scaffold_165.53


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|108762920|ref|YP_633223.1|3.00E-24aquaporin Z [Myxococcus xanthus DK 1622]
KOGKOG02232.00E-151Aquaporin (major intrinsic protein family)
nrgi|743835564|ref|XP_010935853.1|1.08E-163PREDICTED: probable aquaporin PIP1-2 [Elaeis guineensis]
Swissprottr|Q9AR14|PIP15_MAIZE1.00E-159Aquaporin PIP1-5
trEMBLtr|B2CZY9|B2CZY9_ANACO5.00E-159Aquaporin {ECO:0000313|EMBL:ACB56912.1}
TAIRAT4G004302.00E-151plasma membrane intrinsic protein 1;4

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000016720618402065197+
Transcript Sequence

Network for GWHGAAEX005537

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00230.19MIP462529.40E-73
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0055085Biological Processtransmembrane transport
GO:0015267Molecular Functionchannel activity
GO:0016020Cellular Componentmembrane

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms18.950
SRR2545915Juvenile tuber43.860
SRP108465SRR5643513five period of Gastrodia elata16.170
SRR5643514five period of Gastrodia elata23.900
SRR5643515five period of Gastrodia elata19.370
SRR5643524five period of Gastrodia elata21.870
SRR5643525five period of Gastrodia elata50.770
SRR5643528five period of Gastrodia elata33.090
SRR5643658five period of Gastrodia elata65.040
SRR5643659five period of Gastrodia elata7.890
SRR5643660five period of Gastrodia elata5.200
SRR5643661five period of Gastrodia elata6.640
SRR5643662five period of Gastrodia elata6.120
SRR5643663five period of Gastrodia elata11.630
SRR5643664five period of Gastrodia elata9.610
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_116.840
SRR6049655Rhizomagastrodiae_C368-T10_good_120.260
SRR6049656Rhizomagastrodiae_C368-T07_good_118.550
SRR6049657Rhizomagastrodiae_C368-T07_good_120.620
SRR6049658Rhizomagastrodiae_C368-T04_good_15.790
SRR6049659Rhizomagastrodiae_C368-T04_good_15.170
SRR6049660Rhizomagastrodiae_C368-T01_good_114.070
SRR6049661Rhizomagastrodiae_C368-T04_good_19.120
SRR6049662Rhizomagastrodiae_C368-T01_good_17.430
SRR6049663Rhizomagastrodiae_C368-T01_good_16.110
SRR6049664Rhizomagastrodiae_C368-T10_good_112.300
SRR6049665Rhizomagastrodiae_C368-T10_good_112.300
SRP279888GastroGastrodia elata tuber 2.95
JuvenJuvenile tuber4.66
Mother_GastroMother tuber of Gastrodia elata 2.02
Mother_JuvenMother tuber of Juvenile 3.81