Detail information of GWHGAAEX005538/evm.TU.scaffold_165.54


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743835509|ref|XP_010935836.1|3.25E-95PREDICTED: uncharacterized protein LOC105055636 [Elaeis guineensis]
trEMBLtr|M0U767|M0U767_MUSAM3.00E-90Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_AchrUn_randomP07560_001}
TAIRAT1G210008.00E-62PLATZ transcription factor family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000016721028882104575+
Transcript Sequence

Network for GWHGAAEX005538

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04640.13PLATZ731467.20E-29
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyPLATZ

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms1.440
SRR2545915Juvenile tuber2.800
SRP108465SRR5643513five period of Gastrodia elata6.600
SRR5643514five period of Gastrodia elata7.160
SRR5643515five period of Gastrodia elata4.760
SRR5643524five period of Gastrodia elata5.380
SRR5643525five period of Gastrodia elata20.370
SRR5643528five period of Gastrodia elata17.730
SRR5643658five period of Gastrodia elata19.900
SRR5643659five period of Gastrodia elata3.760
SRR5643660five period of Gastrodia elata3.220
SRR5643661five period of Gastrodia elata4.270
SRR5643662five period of Gastrodia elata3.370
SRR5643663five period of Gastrodia elata4.070
SRR5643664five period of Gastrodia elata8.070
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_110.460
SRR6049655Rhizomagastrodiae_C368-T10_good_127.560
SRR6049656Rhizomagastrodiae_C368-T07_good_117.150
SRR6049657Rhizomagastrodiae_C368-T07_good_17.800
SRR6049658Rhizomagastrodiae_C368-T04_good_113.170
SRR6049659Rhizomagastrodiae_C368-T04_good_111.670
SRR6049660Rhizomagastrodiae_C368-T01_good_17.570
SRR6049661Rhizomagastrodiae_C368-T04_good_111.420
SRR6049662Rhizomagastrodiae_C368-T01_good_112.050
SRR6049663Rhizomagastrodiae_C368-T01_good_111.460
SRR6049664Rhizomagastrodiae_C368-T10_good_126.110
SRR6049665Rhizomagastrodiae_C368-T10_good_126.110
SRP279888GastroGastrodia elata tuber 2.80
JuvenJuvenile tuber1.39
Mother_GastroMother tuber of Gastrodia elata 7.50
Mother_JuvenMother tuber of Juvenile 0.92