Gene detail

Detail information of GWHGAAEX005548/evm.TU.scaffold_166.6

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|604317768\|gb\|EYU29589.1\|	6.01E-159	hypothetical protein MIMGU_mgv1a004041mg [Erythranthe guttata]
Swissprot	tr\|Q9SHJ5\|GPAT1_ARATH	2.00E-129	Glycerol-3-phosphate acyltransferase 1
trEMBL	tr\|A0A022QPS7\|A0A022QPS7_ERYGU	2.00E-159	Uncharacterized protein {ECO:0000313\|EMBL:EYU29589.1}
TAIR	AT1G06520	6.00E-129	glycerol-3-phosphate acyltransferase 1

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000171	105648	109840	-

Transcript Sequence
>GWHTAAEX005548 CCCTAATCCAATGGGAGGAAGTACACTTGAATCAGTATATATGTACAGTGCAAGCCTCATAGCAAAATCCAAACAGAGAAACATGGTAGCTCCAATTTCTGTTCTGAAGAAGACTGCAACTGCTTGGCTCAATGCATTTTATAGAGCAGAAATTAGGAGGATCAGAAACTTGTTCTTATTCTTCTTCCTCCACACAAACCCTTCAAGAATGACAACAAATCAGGAGAATCAACTGCAGCCTCTCTCGTTAATCAATTCAAGACACCTTCAAGGAAGAAAAGACTACACCTTGCTGCTCAATTTCAATAACTCGCTACTGAGAACAAACTCCCTCTTCCCCTTCTTCATGCTTGTAGCCTTTGAAGGCAGCGGCTTGATCAGAGCCACTCTTCTTCTTCTGGCTTGGCCAGTTGTCCTTCTTCTCGGGCAGAGCAGTGACTTGGCGTTAAGGGTGATGGTTTTCGTCGCATTCTGCGGGTTGAAGTGTGGGGACATGGATGTGGTGGCGAGGGCGGTGCTGCCTAAGATTTATGCGGAGGAGATGGATTGCCGGAGTTATGAGGTAGCGGCAGCGGCGGGGAGAAGAGTGGTGGTTAGTTGCTTGCCGAAGATTATGGTGGAGAGGTTTGTGTTCGACTGTTTTGGTTGGGAGAGGACTGAGGTTTTAGGTCCGGAGTTGGAGGTAGGGAGAGGGAAGAGGCGCTTCACCGGAAAGTTTGCCGTCCGAGATACTGAGACACGGAGGTTTGCGGCGGTTAAGGAACGGTTTCAAGGAGAGACGGCAGATGTGGGACTCGTCAGAGTTTCGAATGTGAATGACCAACTTCTCATCATCCCTTGCTCTAAGGATGTGTACGCAATAACCAAAAAGAAGGCGAGATCGAGCAGAGCAACGACCGATTCCCCGACAAAGCCGGTCATCATCTTCCACGACGGGCGGCTGGCGTTTCTCCCGACCCCGTCGGCATTCCTTTGCCTCCTTATGTACCTTCCGCTTGGGTCCCTCCTCTGCCTTCTCCGCATACTGGTCGGCCTGGTCTTCCCGTACTCCCTCTCCAATACTCTAGAGGCTGCACTGGGCATGCGCTTTCGCGTCGTCCTCCCGCCATGCGGCCGACTTCCACCGCCCGCCGTCGGAGTTATCTACGCGTGCACCCACCGCACCCTCTTAGACCCCGTATTACTCTCCCATTCCCTCTCTCGCCCCGTCCCCGCAGTGACCTACAGCCTCAGCCGCCTGTCCGAAGCCCTCTCGCCGATCCCCACTGTCCGCCTCTCCCGCGACCGCCGCCGGGACTCCCTCACCATGCACCGCCTCCTCTCCTCCGGCGACCTCGCCGTCTGCCCCGAAGGCACCACCTGCCGCGAGCCCTTTCTGCTCCGCTTCAGCCCCCTCTTCGCCGAGATGACCGACGAGATAGAGCCCGTCGCGATGAGCGCCGACTGCTCCATGTTCTACGCCACCACCGCCACCGGGAAGAAGTTCTTGGACCCCGCATTCTTCTTCCTGAACCCCACGCCCGCCTATCAGGTCAACTTTCTCGGCCGTCTTCCCAAGGAGGCGACCGTCGCCGGCGGCTACTCAGCAGTAGACGTCGCCAATCGGGTTCAGAGGGATCTCGCCCAGGAGCTCGGATTTCGGTGCACAGGCCTCACCAGGAGGGATAAGTATCTCTCCCTTGCCGGAAACCATGGCCTCCTGCCCGAAGCCCTTCAAGATGAATGAAGATGCGGTTCTTCTAATCTTTTTTTATATTATAAAAGGTGTCCCGGTATTTATATAGTATCAGAATTTAATTTATGGAGATTTGAATAATAGTTTGATCCAATTATATCACGTTGTCTTCTTCAAAAACTGAAATGTTGGAATTTTGCCGCCAGGTTAACGC

Network for GWHGAAEX005548

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF12710.6	HAD	96	251	1.50E-08

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K13508	GPAT	Metabolic pathways	map01100
		Biosynthesis of secondary metabolites	map01110
		Glycerolipid metabolism	map00561
		Glycerophospholipid metabolism	map00564

Gene Ontology

GO term	Ontology	Name
GO:0016746	Molecular Function	transferase activity, transferring acyl groups

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	0.120
SRP064423	SRR2545915	Juvenile tuber	0.000
SRP108465	SRR5643513	five period of Gastrodia elata	2.100
	SRR5643514	five period of Gastrodia elata	0.750
	SRR5643515	five period of Gastrodia elata	0.390
	SRR5643524	five period of Gastrodia elata	0.380
	SRR5643525	five period of Gastrodia elata	5.650
	SRR5643528	five period of Gastrodia elata	0.300
	SRR5643658	five period of Gastrodia elata	0.930
	SRR5643659	five period of Gastrodia elata	0.310
	SRR5643660	five period of Gastrodia elata	0.150
	SRR5643661	five period of Gastrodia elata	0.150
	SRR5643662	five period of Gastrodia elata	0.110
	SRR5643663	five period of Gastrodia elata	0.110
	SRR5643664	five period of Gastrodia elata	0.280
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	0.890
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	1.690
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	0.980
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	0.490
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	1.890
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	1.030
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	0.760
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	0.560
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	0.310
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	1.080
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	2.580
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	2.580
SRP279888	Gastro	Gastrodia elata tuber	0.39
	Juven	Juvenile tuber	0.00
	Mother_Gastro	Mother tuber of Gastrodia elata	0.09
	Mother_Juven	Mother tuber of Juvenile	0.13