Detail information of GWHGAAEX005553/evm.TU.scaffold_166.14


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743890345|ref|XP_010911053.1|2.92E-42PREDICTED: interactor of constitutive active ROPs 4-like [Elaeis guineensis]
Swissprottr|Q9M9F9|ICR4_ARATH2.00E-20Interactor of constitutive active ROPs 4
trEMBLtr|M8AS39|M8AS39_AEGTA1.00E-35Uncharacterized protein {ECO:0000313|EMBL:EMT07287.1}
TAIRAT1G784307.00E-20ROP interactive partner 2

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000171686998688587+
Transcript Sequence

Network for GWHGAAEX005553

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms0.270
SRR2545915Juvenile tuber0.530
SRP108465SRR5643513five period of Gastrodia elata3.790
SRR5643514five period of Gastrodia elata7.190
SRR5643515five period of Gastrodia elata3.730
SRR5643524five period of Gastrodia elata4.300
SRR5643525five period of Gastrodia elata0.000
SRR5643528five period of Gastrodia elata0.070
SRR5643658five period of Gastrodia elata0.000
SRR5643659five period of Gastrodia elata4.070
SRR5643660five period of Gastrodia elata1.060
SRR5643661five period of Gastrodia elata1.590
SRR5643662five period of Gastrodia elata0.500
SRR5643663five period of Gastrodia elata0.530
SRR5643664five period of Gastrodia elata0.170
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_16.070
SRR6049655Rhizomagastrodiae_C368-T10_good_17.130
SRR6049656Rhizomagastrodiae_C368-T07_good_17.270
SRR6049657Rhizomagastrodiae_C368-T07_good_17.280
SRR6049658Rhizomagastrodiae_C368-T04_good_12.860
SRR6049659Rhizomagastrodiae_C368-T04_good_11.900
SRR6049660Rhizomagastrodiae_C368-T01_good_12.340
SRR6049661Rhizomagastrodiae_C368-T04_good_15.680
SRR6049662Rhizomagastrodiae_C368-T01_good_112.440
SRR6049663Rhizomagastrodiae_C368-T01_good_14.200
SRR6049664Rhizomagastrodiae_C368-T10_good_17.760
SRR6049665Rhizomagastrodiae_C368-T10_good_17.760
SRP279888GastroGastrodia elata tuber 0.24
JuvenJuvenile tuber0.35
Mother_GastroMother tuber of Gastrodia elata 0.08
Mother_JuvenMother tuber of Juvenile 0.12