Detail information of GWHGAAEX005561/evm.TU.scaffold_166.28


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|695017522|ref|XP_009395702.1|1.55E-85PREDICTED: pollen-specific leucine-rich repeat extensin-like protein 3 [Musa acuminata subsp. malaccensis]
trEMBLtr|M0SM15|M0SM15_MUSAM2.00E-94Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr4P07980_001}
TAIRAT5G145407.00E-16Protein of unknown function (DUF1421)

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000017111988041209521+
Transcript Sequence

Network for GWHGAAEX005561

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF07223.10DUF14213864321.30E-12
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms25.000
SRR2545915Juvenile tuber36.850
SRP108465SRR5643513five period of Gastrodia elata35.100
SRR5643514five period of Gastrodia elata41.490
SRR5643515five period of Gastrodia elata42.250
SRR5643524five period of Gastrodia elata39.320
SRR5643525five period of Gastrodia elata57.490
SRR5643528five period of Gastrodia elata79.200
SRR5643658five period of Gastrodia elata75.470
SRR5643659five period of Gastrodia elata32.200
SRR5643660five period of Gastrodia elata26.940
SRR5643661five period of Gastrodia elata37.320
SRR5643662five period of Gastrodia elata39.120
SRR5643663five period of Gastrodia elata27.380
SRR5643664five period of Gastrodia elata29.190
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_128.990
SRR6049655Rhizomagastrodiae_C368-T10_good_145.930
SRR6049656Rhizomagastrodiae_C368-T07_good_136.300
SRR6049657Rhizomagastrodiae_C368-T07_good_130.760
SRR6049658Rhizomagastrodiae_C368-T04_good_134.670
SRR6049659Rhizomagastrodiae_C368-T04_good_134.300
SRR6049660Rhizomagastrodiae_C368-T01_good_131.220
SRR6049661Rhizomagastrodiae_C368-T04_good_129.140
SRR6049662Rhizomagastrodiae_C368-T01_good_134.600
SRR6049663Rhizomagastrodiae_C368-T01_good_134.850
SRR6049664Rhizomagastrodiae_C368-T10_good_137.700
SRR6049665Rhizomagastrodiae_C368-T10_good_137.700
SRP279888GastroGastrodia elata tuber 23.81
JuvenJuvenile tuber43.01
Mother_GastroMother tuber of Gastrodia elata 73.36
Mother_JuvenMother tuber of Juvenile 73.46