Detail information of GWHGAAEX005563/evm.TU.scaffold_166.30
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| KOG | KOG0916 | 0 | 1,3-beta-glucan synthase/callose synthase catalytic subunit |
| nr | gi|743756957|ref|XP_010919535.1| | 0 | PREDICTED: callose synthase 12-like [Elaeis guineensis] |
| Swissprot | tr|Q9ZT82|CALSC_ARATH | 0 | Callose synthase 12 |
| trEMBL | tr|A0A067JX73|A0A067JX73_JATCU | 0 | Uncharacterized protein {ECO:0000313|EMBL:KDP24129.1} |
| TAIR | AT4G03550 | 0 | glucan synthase-like 5 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000171 | 1325116 | 1335200 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX005563
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF14288.5 | FKS1_dom1 | 171 | 283 | 2.00E-41 |
| PF02364.14 | Glucan_synthase | 885 | 1684 | 1.30E-271 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | GT48 |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006075 | Biological Process | (1->3)-beta-D-glucan biosynthetic process |
| GO:0003843 | Molecular Function | 1,3-beta-D-glucan synthase activity |
| GO:0016020 | Cellular Component | membrane |
| GO:0000148 | Cellular Component | 1,3-beta-D-glucan synthase complex |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 25.980 |
| SRR2545915 | Juvenile tuber | 27.190 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 23.410 |
| SRR5643514 | five period of Gastrodia elata | 22.050 | |
| SRR5643515 | five period of Gastrodia elata | 27.420 | |
| SRR5643524 | five period of Gastrodia elata | 23.400 | |
| SRR5643525 | five period of Gastrodia elata | 23.410 | |
| SRR5643528 | five period of Gastrodia elata | 15.070 | |
| SRR5643658 | five period of Gastrodia elata | 18.410 | |
| SRR5643659 | five period of Gastrodia elata | 29.450 | |
| SRR5643660 | five period of Gastrodia elata | 26.990 | |
| SRR5643661 | five period of Gastrodia elata | 26.670 | |
| SRR5643662 | five period of Gastrodia elata | 25.390 | |
| SRR5643663 | five period of Gastrodia elata | 26.130 | |
| SRR5643664 | five period of Gastrodia elata | 29.580 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 28.340 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 21.490 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 26.350 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 26.360 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 31.280 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 32.310 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 30.480 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 31.280 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 30.790 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 31.870 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 25.080 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 25.080 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 18.91 |
| Juven | Juvenile tuber | 29.16 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 22.86 | |
| Mother_Juven | Mother tuber of Juvenile | 34.95 |