Detail information of GWHGAAEX005568/evm.TU.scaffold_166.40


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743774323|ref|XP_010917513.1|0PREDICTED: protein trichome birefringence-like 14 [Elaeis guineensis]
Swissprottr|F4K5L5|TBL16_ARATH4.00E-174Protein trichome birefringence-like 16
trEMBLtr|W1PCX8|W1PCX8_AMBTC0Uncharacterized protein {ECO:0000313|EMBL:ERN07762.1}
TAIRAT5G206807.00E-171TRICHOME BIREFRINGENCE-LIKE 16

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000017116879621689780-
Transcript Sequence

Network for GWHGAAEX005568

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF14416.5PMR5N1612142.50E-15
PF13839.5PC-Esterase2155002.50E-79
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms48.930
SRR2545915Juvenile tuber48.890
SRP108465SRR5643513five period of Gastrodia elata39.550
SRR5643514five period of Gastrodia elata36.230
SRR5643515five period of Gastrodia elata44.390
SRR5643524five period of Gastrodia elata38.490
SRR5643525five period of Gastrodia elata50.410
SRR5643528five period of Gastrodia elata52.250
SRR5643658five period of Gastrodia elata53.720
SRR5643659five period of Gastrodia elata34.440
SRR5643660five period of Gastrodia elata30.940
SRR5643661five period of Gastrodia elata33.340
SRR5643662five period of Gastrodia elata32.480
SRR5643663five period of Gastrodia elata31.530
SRR5643664five period of Gastrodia elata26.430
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_146.610
SRR6049655Rhizomagastrodiae_C368-T10_good_151.970
SRR6049656Rhizomagastrodiae_C368-T07_good_143.460
SRR6049657Rhizomagastrodiae_C368-T07_good_149.960
SRR6049658Rhizomagastrodiae_C368-T04_good_152.660
SRR6049659Rhizomagastrodiae_C368-T04_good_164.550
SRR6049660Rhizomagastrodiae_C368-T01_good_153.070
SRR6049661Rhizomagastrodiae_C368-T04_good_152.490
SRR6049662Rhizomagastrodiae_C368-T01_good_138.960
SRR6049663Rhizomagastrodiae_C368-T01_good_141.160
SRR6049664Rhizomagastrodiae_C368-T10_good_137.890
SRR6049665Rhizomagastrodiae_C368-T10_good_137.890
SRP279888GastroGastrodia elata tuber 37.84
JuvenJuvenile tuber53.87
Mother_GastroMother tuber of Gastrodia elata 140.51
Mother_JuvenMother tuber of Juvenile 110.76