Gene detail

Detail information of GWHGAAEX005572/evm.TU.scaffold_166.49

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|743814555\|ref\|XP_010930072.1\|	0	PREDICTED: uncharacterized protein LOC105051371 isoform X1 [Elaeis guineensis]
trEMBL	tr\|D7TAP1\|D7TAP1_VITVI	0	Putative uncharacterized protein {ECO:0000313\|EMBL:CBI27564.3}
TAIR	AT1G27850	4.00E-105	Unannotated protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000171	2243988	2281549	+

Transcript Sequence
>GWHTAAEX005572 GTAATTTTCTAAAATACAGAAGTGCAAAAAATTACCCTCACGGTACTAAGAGAGAGAATGAAATGGAAGGGGAAACCTTGCTTGAGAGGAACCTCCATTAAAGAAAGAGAAACCCTAACGAGTCTGTTCCAACTTTGGAATCGCTGGAAGCACAGGCGCGCACGGTCGATGGTGCCTTTGTCCGATCTGCTTCACAGCAGCATCACGAGTCTTTCAGCCGTTTGAAACTTGTGATCGAACGTTGGCCAATGGTGGCAGCGGCTTGGCTGCAATTTGGAGCAGGAATGTTGAAACTCTAGGCAAAATGGGTGCGGGAAAGGCTGCGATAGCGGGAACACTGAGGCACAGTTGAGTACTGAATGTGAACATTGGCACTTTAGGTACAATTCCGCTATTAATTTGGTTTGAGGCAATGGTAATGCTTGGATATCTGTAGAGAAAGAATATTTTCATGAAAGATGGCGCCTTTGCCAGCAATGAGATGCTCACCTGGAAAAGAACGCATGATAGAAAATAATCATAAGAGGGGGCGCAGCTTTGAGAGTGGATTGAGTTTTAAGAGCAAGGATGATGACCTTATGTTGTTCAATGAGATGCAAAATCAAGAGAAAGATAACTTTCTTCTCCATACAGTTGATGATTTTGAGGAATCTATTTCAAAGTTGAAGCATTTCTCTGACTTCAAGCTAGGCGTTCAGACTAGAGGAGAGGGTAGCGATTTGCTTAATGTGGAAGGTGACAAAAATGACTATGATTGGCTATTAACCCCTCCAGACACACCTCTTTTTCCATCATTGGATGATGAGTATCCACAACCAATTAATCTTGAATCTAGAGGTAGGGCAAGAAGTGAACCAATTACAATTTCGAGATCAGTGGCTGATAAAAGTTGCCCGGCAAGTCGAACTAGTTCTAGTCCATGCAGATTAAGTTCATCTCCTCGATCAGGTGGCCATTTCACACAAATGAGAGGGAGGTCATCTCCAGTCCCACGATCTAGTTCACCTCCTGTCATAAGGTCTACAACACCTACACGAAGGACTTCCACACCAAACAAACAATCCGCACCTACTATGAGGTCATCAGCTCCTACATTACAAAAGAATAGTGCTGGTTGTAGCACCCAATCATCAAAATATGGTGCTAGAGGTCCCTCTCCAATGAAGGCAAGTCGGGGGAACTCTGCATCATCAACATTACAAGGGTGGCAAATGACCATCCCTGGTTTTGCATTAGACACACCGCCAAACCTACGAACTTCTTTATTAGATCGACCAGTGTCACATGCAAGAGGTTCTTCTCCAGCTTCTTTAAATGGGAGGGAATCAGCAGGGAGACTTGGTAGGAAGTCAATGTCACCGACAAGTTCAAGAAGTATTAGTTCATCACATAGTCAAGAAAGAGACCGCCTCAGCTCTTATAGTAGGTGTTCTATTCTGTCCTCTGGTGATGATGATGAGGAATCTGTGCATCCTTTAAGAGCTGGAGTCTCTAGTCGCTTTCCTGCCAGAAAAGATGGTGTATGGGCAAGCAATAATGCCATGCCATTTTCTAGAAAACCAACTAGATGTTCACCAACAAATTCTACACCTAAAAGGTCTTTTGATTCAGCCCTTAGATTAATGGATCAGCGCAAAACACCTCAAAATATGTTCAGACCACTTTTGTCTAGTGTTCCTGCGACAACATTCAGGCCCATTTTCTCAAGGAATTCCTCACTTACAACTAGCAGTAATGCAAGCTCTGAACAAGCTCTTTTTAGTGTTGCGCTTGATGTGGAAGGTGGTGAGCTTGAGCAGACTGAAATTCCTGCTGGATGGGAAAGGTCTGAAGCATCTGAAAATCATGAGGAAGTATTTTTGTTTGATAAAATGGATGAGATTATTGAAGATACGAGTCATGAGGTACTCTCTAATAAACCTGAGAAATGTGATGCAAATTTTGGTGAAAATTTGTCTAAGAAATTTGATTCAGAAGATGTTCATAATCCCAGTGTTCACATTGGAATTGAAACAAACAATACATTTCATTACACACAACATTTTACTGACAACCGTTGCGATATGGATGGCCTTATAATGAGTGCAGTTTGCTCAAAATGTGGTAAAGAATGTAAAACTCTAGATATGAATGGAAACATAAAATTATGCCATGATTGTGCTGAAGAAAGGCTTTGTGTTACTGAAGTACCTCTAACATTTGCATCTTCGATTAAAAATGTCGCAATTTCGATGGACACAGCAATGGGTACAGCTTGCAATGAACTACAAAGACATGAAGTTTCTGAATTTCATGAGGTGGGTGACATTATGGAGTCCAATTGGCTACCAAACATTTGTTCAATTCAAAGGGAGTCTGAGCTTTCTGAACAGCAGGATAAAAGGGATATAAATGCTACCCAAGATTGCAGCATTAATGTACTACAGTTATCAGATCATGATGTTAACCCCAGTTTAAAAGTTGATATTCCTGAAGGCACAGGCATTTCTGTGCTTCTACTTCCTAGATCTGGTAGCAGTAAATGGCCTATTTTGCAAGGAAAGTCTGTGTCTGCTACTAATATTCAATGTTCTGAGCCTTCTTATTCAAGAGGTAATATTAATTGCTTGAGAAGAAGTATTGGCCGAGTTTGTACTTCAGCTTCTTCATCAGTTGATCTTGGATCATCTAGGCAGGCACATACTTCCGTTCTGCATCAGTTATGTAGGGAAGGTGAGGCAGACACTATGGTTAATTGTATTGATAGAAATGCTCAAAGTATGAGTTTGTCTGATGAGCTTTCAATGAGTTGCTATGAATCCAGGCACCTCAAAAGTGAATGCGAGGAAACTACAAGTTCCTCTACTGAATTCTTAAGATGTGACTCAGCAAGAGAACTAAAATCTGTAACTGAAGAACATGCCATTTCTTTGGGTCAATCAAGTATTAATGCCATTCCTTCTTCACCTTCAAGGCCAGTTAATTCTGAGAACTACTTATCCGACCGTACTGGAAGTTATATGACAGTTTGTCCCTCTGATCCACAAATTATGAATCAAAGAAATATTGATATATCTTGCTCTTCAACATCAGAAATTTTGGGTACTGAAGTCTGCACTTCATCCATTCATACTGATGGATGCTCTCAAAACAACGAAGGCAAAATTCAAAATGTAGAAGGATCAAGAGATATTAGTTGTTGCTCTGAAATGGAAGAAAATTATACTATGTTGAACTGCTCTCCAAATCATAACTTGGATGTAGCTACCAACAACCCTTCCAATGTGACTTTTCAATTTCCATGTGGTTGCAGTGAACTTGAGGGCAGCCAGACTGAGTGTACGCCCTCCCATAATCCAGCTTATTTAGAAGAGTCCGATAGTCATTTTATTTCGCAAACATCTGAAAACGATGCATGTTTTTCTACCACAGAACCAAGCACAGTTATCCTTGATCATGGAAACCATGAAGATTCAGGCGTAATAATTGAGCTCCCAAGAGGACGCATGTCAAGAAGCTTGACATTGGATGAAGCAACTGATACTATATTGTTCTGCAGTTCTATTGTTCATGACTTGGCTTACAAAGCAGCTACAATTGCGATGGAAAGGGCATCAAACCTGCTGTCTGAGCCTCGTCAGGCTTCGCACCCCACATTTACAAACCTGGGAAAGCCTATCCCTGAACTAAGAGAATCATGGAAAGTGCCTATTAATAATAATAAGCACACAACAAGATCCCAGAAATTCAGAAGAAAGCGACTAGAATCTCAGACCAAATCTTCTCCTCAAAAAGAAGTGGAGAATGATGTGAATGTTCATGAATTCATAGATTCAAATAGTGAGCTTCCTAGAAAGCTCGATACTGCAAAGCCTTTAAAGTTGGAATCTAAGTGCAATTGTACTGTGATGTAGAAGTATCCATAAAGGCGCAACTTTCATGTGGATTGAAACAATGCTGGCTCTGCCCCTTTGCTTTGATTTATCTATTCTTATGGAGCTTTTTATATAATTTTGAGGCATGGTCAGCATGCACGCCTCCCTTCCCAATTTCTTCTGTAATGAATCAACTCTCCAGTCATCATAATGATGTTTGTAAAATTAGTTCTTTTGTTTTTTGGTCATGGGAGAGAATGAAGCTATATGATTTGGCTCCACCACATGCATTATTTATTTATTTAGTTGATGGTTTACTCTTGCTGCTACTAAGCTTCAGTGGGAGAAAATGCTTTAGGCTGAGCTTCTCTTTTGTAAATGACCTTTCCAAGTGTTTGTTGCTTTGTGCTTAAAATCCTATGGTAAATGTTTCATTTAAGTGAGATTTAAGGGGTTAAGGATTATTTGACTGAGGCCAGTTGTTCTATGGAACATTTTTGGTATTATATATATGAGCAAAATCAGCAAAACCAGCTCTTTAGTATAAACTGAGCACGAATGGGATGTTCAGAACATATATACAGTGTTGGTTACAATGGCACATAAATGTATTAGCATTGTTTTTGTTGAAGAAACCTGTTCTTGGACATGAGGTATATATATCATCTTTATTGGTTGATGTAAATCACATGA

Network for GWHGAAEX005572

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

>GWHPAAEX005572
MAPLPAMRCSPGKERMIENNHKRGRSFESGLSFKSKDDDLMLFNEMQNQEKDNFLLHTVDDFEESISKLKHFSDFKLGVQTRGEGSDLLNVEGDKNDYDWLLTPPDTPLFPSLDDEYPQPINLESRGRARSEPITISRSVADKSCPASRTSSSPCRLSSSPRSGGHFTQMRGRSSPVPRSSSPPVIRSTTPTRRTSTPNKQSAPTMRSSAPTLQKNSAGCSTQSSKYGARGPSPMKASRGNSASSTLQGWQMTIPGFALDTPPNLRTSLLDRPVSHARGSSPASLNGRESAGRLGRKSMSPTSSRSISSSHSQERDRLSSYSRCSILSSGDDDEESVHPLRAGVSSRFPARKDGVWASNNAMPFSRKPTRCSPTNSTPKRSFDSALRLMDQRKTPQNMFRPLLSSVPATTFRPIFSRNSSLTTSSNASSEQALFSVALDVEGGELEQTEIPAGWERSEASENHEEVFLFDKMDEIIEDTSHEVLSNKPEKCDANFGENLSKKFDSEDVHNPSVHIGIETNNTFHYTQHFTDNRCDMDGLIMSAVCSKCGKECKTLDMNGNIKLCHDCAEERLCVTEVPLTFASSIKNVAISMDTAMGTACNELQRHEVSEFHEVGDIMESNWLPNICSIQRESELSEQQDKRDINATQDCSINVLQLSDHDVNPSLKVDIPEGTGISVLLLPRSGSSKWPILQGKSVSATNIQCSEPSYSRGNINCLRRSIGRVCTSASSSVDLGSSRQAHTSVLHQLCREGEADTMVNCIDRNAQSMSLSDELSMSCYESRHLKSECEETTSSSTEFLRCDSARELKSVTEEHAISLGQSSINAIPSSPSRPVNSENYLSDRTGSYMTVCPSDPQIMNQRNIDISCSSTSEILGTEVCTSSIHTDGCSQNNEGKIQNVEGSRDISCCSEMEENYTMLNCSPNHNLDVATNNPSNVTFQFPCGCSELEGSQTECTPSHNPAYLEESDSHFISQTSENDACFSTTEPSTVILDHGNHEDSGVIIELPRGRMSRSLTLDEATDTILFCSSIVHDLAYKAATIAMERASNLLSEPRQASHPTFTNLGKPIPELRESWKVPINNNKHTTRSQKFRRKRLESQTKSSPQKEVENDVNVHEFIDSNSELPRKLDTAKPLKLESKCNCTVM

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	8.510
SRP064423	SRR2545915	Juvenile tuber	8.920
SRP108465	SRR5643513	five period of Gastrodia elata	4.570
	SRR5643514	five period of Gastrodia elata	4.860
	SRR5643515	five period of Gastrodia elata	4.760
	SRR5643524	five period of Gastrodia elata	5.000
	SRR5643525	five period of Gastrodia elata	3.200
	SRR5643528	five period of Gastrodia elata	3.910
	SRR5643658	five period of Gastrodia elata	3.470
	SRR5643659	five period of Gastrodia elata	6.440
	SRR5643660	five period of Gastrodia elata	6.370
	SRR5643661	five period of Gastrodia elata	6.120
	SRR5643662	five period of Gastrodia elata	6.260
	SRR5643663	five period of Gastrodia elata	6.370
	SRR5643664	five period of Gastrodia elata	5.930
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	5.520
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	7.200
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	6.030
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	5.420
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	3.820
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	4.620
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	5.740
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	5.130
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	5.240
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	5.070
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	5.660
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	5.660
SRP279888	Gastro	Gastrodia elata tuber	5.73
	Juven	Juvenile tuber	7.32
	Mother_Gastro	Mother tuber of Gastrodia elata	1.94
	Mother_Juven	Mother tuber of Juvenile	3.25