Detail information of GWHGAAEX005579/evm.TU.scaffold_167.12


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG29858.00E-56Uncharacterized conserved protein
nrgi|743787078|ref|XP_010922332.1|2.84E-63PREDICTED: CAX-interacting protein 4-like [Elaeis guineensis]
Swissprottr|Q84Y18|CXIP4_ARATH2.00E-56CAX-interacting protein 4
trEMBLtr|A0A059AFZ9|A0A059AFZ9_EUCGR9.00E-60Uncharacterized protein {ECO:0000313|EMBL:KCW52684.1}
TAIRAT2G289108.00E-56CAX interacting protein 4

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000164693743695022-
Transcript Sequence

Network for GWHGAAEX005579

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13917.5zf-CCHC_3911171.20E-07
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0008270Molecular Functionzinc ion binding
GO:0003676Molecular Functionnucleic acid binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms40.090
SRR2545915Juvenile tuber57.960
SRP108465SRR5643513five period of Gastrodia elata69.120
SRR5643514five period of Gastrodia elata49.760
SRR5643515five period of Gastrodia elata67.380
SRR5643524five period of Gastrodia elata72.240
SRR5643525five period of Gastrodia elata30.970
SRR5643528five period of Gastrodia elata29.620
SRR5643658five period of Gastrodia elata28.150
SRR5643659five period of Gastrodia elata71.460
SRR5643660five period of Gastrodia elata76.410
SRR5643661five period of Gastrodia elata77.340
SRR5643662five period of Gastrodia elata67.070
SRR5643663five period of Gastrodia elata41.510
SRR5643664five period of Gastrodia elata30.760
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_136.440
SRR6049655Rhizomagastrodiae_C368-T10_good_136.680
SRR6049656Rhizomagastrodiae_C368-T07_good_140.570
SRR6049657Rhizomagastrodiae_C368-T07_good_140.980
SRR6049658Rhizomagastrodiae_C368-T04_good_142.510
SRR6049659Rhizomagastrodiae_C368-T04_good_151.520
SRR6049660Rhizomagastrodiae_C368-T01_good_137.880
SRR6049661Rhizomagastrodiae_C368-T04_good_142.320
SRR6049662Rhizomagastrodiae_C368-T01_good_143.780
SRR6049663Rhizomagastrodiae_C368-T01_good_144.300
SRR6049664Rhizomagastrodiae_C368-T10_good_139.690
SRR6049665Rhizomagastrodiae_C368-T10_good_139.690
SRP279888GastroGastrodia elata tuber 28.87
JuvenJuvenile tuber86.74
Mother_GastroMother tuber of Gastrodia elata 57.95
Mother_JuvenMother tuber of Juvenile 84.18