Detail information of GWHGAAEX005595/evm.TU.scaffold_168.2


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|392411599|ref|YP_006448206.1|2.00E-50hypothetical protein Desti_3284 [Desulfomonile tiedjei DSM 6799]
KOGKOG31401.00E-111Predicted membrane protein
nrgi|672181101|ref|XP_008810757.1|3.02E-145PREDICTED: transmembrane protein 64-like [Phoenix dactylifera]
Swissprottr|Q8L586|Y4958_ARATH1.00E-12Uncharacterized membrane protein At4g09580
trEMBLtr|M0SFR8|M0SFR8_MUSAM7.00E-142Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr3P18520_001}
TAIRAT1G032601.00E-111SNARE associated Golgi protein family

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000001735700382342+
Transcript Sequence

Network for GWHGAAEX005595

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF09335.10SNARE_assoc651831.80E-24
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms73.040
SRR2545915Juvenile tuber62.700
SRP108465SRR5643513five period of Gastrodia elata71.120
SRR5643514five period of Gastrodia elata61.040
SRR5643515five period of Gastrodia elata60.070
SRR5643524five period of Gastrodia elata70.780
SRR5643525five period of Gastrodia elata94.670
SRR5643528five period of Gastrodia elata106.760
SRR5643658five period of Gastrodia elata128.560
SRR5643659five period of Gastrodia elata37.230
SRR5643660five period of Gastrodia elata44.540
SRR5643661five period of Gastrodia elata39.240
SRR5643662five period of Gastrodia elata59.340
SRR5643663five period of Gastrodia elata45.340
SRR5643664five period of Gastrodia elata60.570
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_149.220
SRR6049655Rhizomagastrodiae_C368-T10_good_150.520
SRR6049656Rhizomagastrodiae_C368-T07_good_146.110
SRR6049657Rhizomagastrodiae_C368-T07_good_162.110
SRR6049658Rhizomagastrodiae_C368-T04_good_158.060
SRR6049659Rhizomagastrodiae_C368-T04_good_168.310
SRR6049660Rhizomagastrodiae_C368-T01_good_155.220
SRR6049661Rhizomagastrodiae_C368-T04_good_158.710
SRR6049662Rhizomagastrodiae_C368-T01_good_146.300
SRR6049663Rhizomagastrodiae_C368-T01_good_144.720
SRR6049664Rhizomagastrodiae_C368-T10_good_150.500
SRR6049665Rhizomagastrodiae_C368-T10_good_150.500
SRP279888GastroGastrodia elata tuber 67.68
JuvenJuvenile tuber71.44
Mother_GastroMother tuber of Gastrodia elata 129.03
Mother_JuvenMother tuber of Juvenile 136.49