Detail information of GWHGAAEX005597/evm.TU.scaffold_168.4


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|146295707|ref|YP_001179478.1|7.00E-65PhzF family phenazine biosynthesis protein [Caldicellulosiruptor saccharolyticus DSM 8903]
KOGKOG30332.00E-94Predicted PhzC/PhzF-type epimerase
nrgi|743858886|ref|XP_010942475.1|2.63E-127PREDICTED: phenazine biosynthesis-like domain-containing protein 1 [Elaeis guineensis]
trEMBLtr|M0U164|M0U164_MUSAM7.00E-125Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr9P17570_001}
TAIRAT1G032102.00E-94Phenazine biosynthesis PhzC/PhzF protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000173119340137367+
Transcript Sequence

Network for GWHGAAEX005597

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02567.15PhzC-PhzF113003.80E-83
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0009058Biological Processbiosynthetic process
GO:0003824Molecular Functioncatalytic activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms15.410
SRR2545915Juvenile tuber18.220
SRP108465SRR5643513five period of Gastrodia elata13.910
SRR5643514five period of Gastrodia elata17.660
SRR5643515five period of Gastrodia elata15.140
SRR5643524five period of Gastrodia elata17.350
SRR5643525five period of Gastrodia elata11.510
SRR5643528five period of Gastrodia elata13.170
SRR5643658five period of Gastrodia elata14.130
SRR5643659five period of Gastrodia elata11.400
SRR5643660five period of Gastrodia elata11.550
SRR5643661five period of Gastrodia elata11.920
SRR5643662five period of Gastrodia elata10.040
SRR5643663five period of Gastrodia elata10.310
SRR5643664five period of Gastrodia elata9.370
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_114.640
SRR6049655Rhizomagastrodiae_C368-T10_good_117.720
SRR6049656Rhizomagastrodiae_C368-T07_good_118.340
SRR6049657Rhizomagastrodiae_C368-T07_good_115.160
SRR6049658Rhizomagastrodiae_C368-T04_good_121.490
SRR6049659Rhizomagastrodiae_C368-T04_good_121.010
SRR6049660Rhizomagastrodiae_C368-T01_good_119.000
SRR6049661Rhizomagastrodiae_C368-T04_good_119.100
SRR6049662Rhizomagastrodiae_C368-T01_good_121.570
SRR6049663Rhizomagastrodiae_C368-T01_good_123.400
SRR6049664Rhizomagastrodiae_C368-T10_good_121.370
SRR6049665Rhizomagastrodiae_C368-T10_good_121.370
SRP279888GastroGastrodia elata tuber 14.34
JuvenJuvenile tuber10.64
Mother_GastroMother tuber of Gastrodia elata 9.58
Mother_JuvenMother tuber of Juvenile 7.41