Detail information of GWHGAAEX005616/evm.TU.scaffold_168.25


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG31062.00E-108ER lumen protein retaining receptor
nrgi|747055130|ref|XP_011073801.1|3.12E-133PREDICTED: ER lumen protein-retaining receptor-like [Sesamum indicum]
Swissprottr|Q8VWI1|ERD2B_ARATH1.00E-127ER lumen protein-retaining receptor B
trEMBLtr|V7B459|V7B459_PHAVU6.00E-133ER lumen protein-retaining receptor {ECO:0000256|RuleBase:RU000634}
TAIRAT1G293302.00E-108ER lumen protein retaining receptor family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000173787233817339+
Transcript Sequence

Network for GWHGAAEX005616

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00810.17ER_lumen_recept281712.00E-51
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006621Biological Processprotein retention in ER lumen
GO:0046923Molecular FunctionER retention sequence binding
GO:0016021Cellular Componentintegral component of membrane

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms42.850
SRR2545915Juvenile tuber54.340
SRP108465SRR5643513five period of Gastrodia elata46.270
SRR5643514five period of Gastrodia elata45.170
SRR5643515five period of Gastrodia elata43.590
SRR5643524five period of Gastrodia elata45.830
SRR5643525five period of Gastrodia elata61.740
SRR5643528five period of Gastrodia elata66.450
SRR5643658five period of Gastrodia elata58.820
SRR5643659five period of Gastrodia elata39.240
SRR5643660five period of Gastrodia elata34.100
SRR5643661five period of Gastrodia elata36.890
SRR5643662five period of Gastrodia elata34.840
SRR5643663five period of Gastrodia elata38.320
SRR5643664five period of Gastrodia elata28.250
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_132.760
SRR6049655Rhizomagastrodiae_C368-T10_good_140.470
SRR6049656Rhizomagastrodiae_C368-T07_good_138.430
SRR6049657Rhizomagastrodiae_C368-T07_good_126.230
SRR6049658Rhizomagastrodiae_C368-T04_good_131.670
SRR6049659Rhizomagastrodiae_C368-T04_good_130.860
SRR6049660Rhizomagastrodiae_C368-T01_good_128.350
SRR6049661Rhizomagastrodiae_C368-T04_good_135.890
SRR6049662Rhizomagastrodiae_C368-T01_good_144.690
SRR6049663Rhizomagastrodiae_C368-T01_good_140.160
SRR6049664Rhizomagastrodiae_C368-T10_good_154.580
SRR6049665Rhizomagastrodiae_C368-T10_good_154.580
SRP279888GastroGastrodia elata tuber 38.15
JuvenJuvenile tuber29.48
Mother_GastroMother tuber of Gastrodia elata 48.13
Mother_JuvenMother tuber of Juvenile 29.96