Detail information of GWHGAAEX005624/evm.TU.scaffold_168.34


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|434394684|ref|YP_007129631.1|0selenium-binding protein [Gloeocapsa sp. PCC 7428]
KOGKOG09180Selenium-binding protein
nrgi|695041468|ref|XP_009408341.1|0PREDICTED: selenium-binding protein 1-like [Musa acuminata subsp. malaccensis]
Swissprottr|Q93WN0|SEBP2_ARATH0Selenium-binding protein 2
trEMBLtr|M0TE66|M0TE66_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr7P02760_001}
TAIRAT4G140400selenium-binding protein 2

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000001739936241016505-
Transcript Sequence

Network for GWHGAAEX005624

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF05694.10SBP56204871.20E-215
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K17285SELENBP1 Metabolic pathways map01100
Sulfur metabolismmap00920

Gene Ontology

GO term OntologyName
GO:0008430Molecular Functionselenium binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms89.710
SRR2545915Juvenile tuber101.840
SRP108465SRR5643513five period of Gastrodia elata141.150
SRR5643514five period of Gastrodia elata177.410
SRR5643515five period of Gastrodia elata155.240
SRR5643524five period of Gastrodia elata187.070
SRR5643525five period of Gastrodia elata147.300
SRR5643528five period of Gastrodia elata185.740
SRR5643658five period of Gastrodia elata132.480
SRR5643659five period of Gastrodia elata114.310
SRR5643660five period of Gastrodia elata109.280
SRR5643661five period of Gastrodia elata127.280
SRR5643662five period of Gastrodia elata107.470
SRR5643663five period of Gastrodia elata114.130
SRR5643664five period of Gastrodia elata109.890
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1135.430
SRR6049655Rhizomagastrodiae_C368-T10_good_1124.540
SRR6049656Rhizomagastrodiae_C368-T07_good_1154.910
SRR6049657Rhizomagastrodiae_C368-T07_good_1115.670
SRR6049658Rhizomagastrodiae_C368-T04_good_1123.910
SRR6049659Rhizomagastrodiae_C368-T04_good_1129.010
SRR6049660Rhizomagastrodiae_C368-T01_good_1112.870
SRR6049661Rhizomagastrodiae_C368-T04_good_1128.920
SRR6049662Rhizomagastrodiae_C368-T01_good_1170.680
SRR6049663Rhizomagastrodiae_C368-T01_good_1151.180
SRR6049664Rhizomagastrodiae_C368-T10_good_1210.260
SRR6049665Rhizomagastrodiae_C368-T10_good_1210.260
SRP279888GastroGastrodia elata tuber 112.47
JuvenJuvenile tuber262.93
Mother_GastroMother tuber of Gastrodia elata 156.30
Mother_JuvenMother tuber of Juvenile 354.45