Detail information of GWHGAAEX005633/evm.TU.scaffold_168.50


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|568842776|ref|XP_006475309.1|8.95E-66PREDICTED: germacrene-D synthase-like [Citrus sinensis]
Swissprottr|Q6JD69|TPS5B_MAIZE6.00E-60Inactive sesquithujene synthase B
trEMBLtr|K3YYB8|K3YYB8_SETIT3.00E-67Uncharacterized protein {ECO:0000313|EnsemblPlants:Si019268m}
TAIRAT5G239601.00E-28terpene synthase 21

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000017314072511410502-
Transcript Sequence

Network for GWHGAAEX005633

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module7

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01397.20Terpene_synth191322.40E-24
PF03936.15Terpene_synth_C2293932.90E-38
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K15803GERD Sesquiterpenoid and triterpenoid biosynthesis map00909

Gene Ontology

GO term OntologyName
GO:0016829Molecular Functionlyase activity
GO:0000287Molecular Functionmagnesium ion binding
GO:0010333Molecular Functionterpene synthase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms0.420
SRR2545915Juvenile tuber0.000
SRP108465SRR5643513five period of Gastrodia elata2.670
SRR5643514five period of Gastrodia elata0.000
SRR5643515five period of Gastrodia elata0.000
SRR5643524five period of Gastrodia elata0.000
SRR5643525five period of Gastrodia elata0.000
SRR5643528five period of Gastrodia elata0.000
SRR5643658five period of Gastrodia elata0.000
SRR5643659five period of Gastrodia elata0.000
SRR5643660five period of Gastrodia elata0.000
SRR5643661five period of Gastrodia elata0.060
SRR5643662five period of Gastrodia elata0.000
SRR5643663five period of Gastrodia elata0.000
SRR5643664five period of Gastrodia elata0.000
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_13.770
SRR6049655Rhizomagastrodiae_C368-T10_good_114.500
SRR6049656Rhizomagastrodiae_C368-T07_good_15.040
SRR6049657Rhizomagastrodiae_C368-T07_good_14.110
SRR6049658Rhizomagastrodiae_C368-T04_good_10.310
SRR6049659Rhizomagastrodiae_C368-T04_good_10.000
SRR6049660Rhizomagastrodiae_C368-T01_good_15.110
SRR6049661Rhizomagastrodiae_C368-T04_good_10.560
SRR6049662Rhizomagastrodiae_C368-T01_good_14.540
SRR6049663Rhizomagastrodiae_C368-T01_good_10.000
SRR6049664Rhizomagastrodiae_C368-T10_good_16.030
SRR6049665Rhizomagastrodiae_C368-T10_good_16.030
SRP279888GastroGastrodia elata tuber 0.00
JuvenJuvenile tuber20.63
Mother_GastroMother tuber of Gastrodia elata 0.00
Mother_JuvenMother tuber of Juvenile 1.06