Gene detail

Detail information of GWHGAAEX005639/evm.TU.scaffold_168.58

Functional Annotation

Database	Orthologs	E value	Annotation
KOG	KOG1339	7.00E-149	Aspartyl protease
nr	gi\|743846199\|ref\|XP_010938774.1\|	2.78E-179	PREDICTED: basic 7S globulin-like [Elaeis guineensis]
Swissprot	tr\|P13917\|7SB1_SOYBN	5.00E-82	Basic 7S globulin low kDa subunit (Precursor)
trEMBL	tr\|A0A061EKJ1\|A0A061EKJ1_THECC	9.00E-171	Eukaryotic aspartyl protease family protein isoform 1 {ECO:0000313\|EMBL:EOY05555.1}
TAIR	AT1G03220	7.00E-149	Eukaryotic aspartyl protease family protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000173	1609324	1610941	+

Transcript Sequence
>GWHTAAEX005639 CCCGTCAACAGAAGCAAAAAATGGCAGCTTGCATCCTCCTCTTCATCTCCATCCTCCTCTCCTCCTCCTCCCCTTCCTCAGCTATCAACCCTAGAGCCCTCGTAGCCCCTATCTCGAAAGACCCCCTCACCGGCCAATACCTCGTCAGCATCAACCAGCGCATCCCGTCCGTCGCCGTCACCCTCTCCGTCGATCTCGGAGGCCGCCACCTTTGGGTCGACTGCGAAAGTGGCTACATCTCCTCCACCTACCGCCCCGCCCGCTGCGGCACCGCCCTCTGCAGCCTCGGCGCCTCCGTCGGCTGCGGCGACTGCGTCGACCCTCCTCGCGCCGGCTGCAACAACGACACCTGCGGCGTCAATCCCGGGAACCCCTTTACCCGCAGTAACACCGGCGGCGAGCTCGCCATCGACGCCCTCTCCCTCCGCTCCACCGACGGCCTCTCCGACGGCCCCGCCGTCTCCGACCCCTCCTTCCTCTTCGCCTGCGCACCTCAATTCCTCACCCGCGGCCTCGCCGTCGGCTCGTCCGGCGTCGCCGGCCTCGGACGCACCAACGCCGCCCCGCCCAGTCAGCTCGCCGGCTTGTTCGGCTTCCGCCGCCGGTTTGCTCTCTGCCTCCCCTCCACCACCCGCTCCAACGGCGTGGTTTTCTTCGGCTATGTACCCTACACCTTCCTCCCCGACGTCGACGCCTCCCAGTCCCTCATCTACACTTCCCTCCTCACCAATCCAGTCAGTACTGCGGGAATTTTCTCCGAAGGGGAAGCGTCTTACGAGTACTTCATCGGCGTCACGGACGTTCGAGTCCAAGGGGCTGATTTGGGTCTGAACAAGACTCTGCTGGTCATCGACAAGGAGACGGGGATCGGGGGGACGAAGATAAGCACGGTGGAGCCGTACACGGTGCTGGAGACGACGATATACAGGGCGCTGACGTCAGCCTTCACGGCGGCTCTGGCGAAGACCGTGATGAGAGCGCCGGCGGTGGCGCCATTCGAGCACTGCTACGAAGCGGGCGGGTTCGGGAGCACGAGGGTGGGCCCGGCAGTCCCCCAGGTGGACTTGGTCCTGCAGTCCGATCAGGTCGTCTGGAGTATTTTCGGCTCCAATTTGATGGTGGAAGCGGAAGAAGGGACGCTCTGTTTAGGGATCTTGAACGGCGGCGTTGCGCCGCGGACCTCGATTGTCATCGGAGGGTATCAGCTGCAGGACAACCTGCTGGAGTTCGACTTGCCGTATTCCAGGCTCGGCTTCAGCTCTTCTCTGCTATTCCGCCAAACCACTTGCTCCAATTTCAACTTCACCCATGCCTCCTAGATCCTGCTCTCGTCTCCATCAGACTGTGATTTATAAGAAACTTATGAGCCGTGGATATGATACTTACTTTTTCTTAACTTATTTAATAATATATTAGGTCTTATATATAAAATTACATTTAATGAGACAAAAATCAGTCTTACTTTTTGGAGTTGGTTCACTATAATAAGAAAAATGGTACTCTGATATGGAAA

Network for GWHGAAEX005639

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module2

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF14543.5	TAXi_N	40	213	6.50E-36
PF14541.5	TAXi_C	253	413	2.30E-52

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	0.260
SRP064423	SRR2545915	Juvenile tuber	0.590
SRP108465	SRR5643513	five period of Gastrodia elata	34.230
	SRR5643514	five period of Gastrodia elata	40.610
	SRR5643515	five period of Gastrodia elata	11.730
	SRR5643524	five period of Gastrodia elata	36.790
	SRR5643525	five period of Gastrodia elata	2.570
	SRR5643528	five period of Gastrodia elata	3.830
	SRR5643658	five period of Gastrodia elata	0.990
	SRR5643659	five period of Gastrodia elata	0.090
	SRR5643660	five period of Gastrodia elata	0.140
	SRR5643661	five period of Gastrodia elata	0.250
	SRR5643662	five period of Gastrodia elata	0.240
	SRR5643663	five period of Gastrodia elata	0.150
	SRR5643664	five period of Gastrodia elata	0.220
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	82.510
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	165.340
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	180.520
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	33.530
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	92.590
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	80.880
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	29.910
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	50.780
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	62.220
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	73.210
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	290.670
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	290.670
SRP279888	Gastro	Gastrodia elata tuber	0.51
	Juven	Juvenile tuber	0.59
	Mother_Gastro	Mother tuber of Gastrodia elata	9.06
	Mother_Juven	Mother tuber of Juvenile	5.18