Detail information of GWHGAAEX005643/evm.TU.scaffold_168.63


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|326402311|ref|YP_004282392.1|4.00E-10putative transporter [Acidiphilium multivorum AIU301]
KOGKOG45992.00E-77Putative mitochondrial/chloroplast ribosomal protein L45
nrgi|743869146|ref|XP_010905742.1|1.17E-131PREDICTED: uncharacterized protein LOC105032861 isoform X1 [Elaeis guineensis]
trEMBLtr|M0T9L9|M0T9L9_MUSAM2.00E-123Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr6P23710_001}
TAIRAT5G273902.00E-77Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000017316764761711797-
Transcript Sequence

Network for GWHGAAEX005643

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04280.14Tim441392836.30E-31
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms17.690
SRR2545915Juvenile tuber19.670
SRP108465SRR5643513five period of Gastrodia elata18.390
SRR5643514five period of Gastrodia elata21.260
SRR5643515five period of Gastrodia elata19.680
SRR5643524five period of Gastrodia elata20.800
SRR5643525five period of Gastrodia elata17.060
SRR5643528five period of Gastrodia elata12.250
SRR5643658five period of Gastrodia elata15.670
SRR5643659five period of Gastrodia elata20.160
SRR5643660five period of Gastrodia elata24.090
SRR5643661five period of Gastrodia elata20.630
SRR5643662five period of Gastrodia elata23.050
SRR5643663five period of Gastrodia elata23.630
SRR5643664five period of Gastrodia elata21.010
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_116.880
SRR6049655Rhizomagastrodiae_C368-T10_good_111.380
SRR6049656Rhizomagastrodiae_C368-T07_good_123.230
SRR6049657Rhizomagastrodiae_C368-T07_good_115.490
SRR6049658Rhizomagastrodiae_C368-T04_good_118.350
SRR6049659Rhizomagastrodiae_C368-T04_good_115.610
SRR6049660Rhizomagastrodiae_C368-T01_good_119.320
SRR6049661Rhizomagastrodiae_C368-T04_good_119.750
SRR6049662Rhizomagastrodiae_C368-T01_good_125.020
SRR6049663Rhizomagastrodiae_C368-T01_good_121.670
SRR6049664Rhizomagastrodiae_C368-T10_good_124.750
SRR6049665Rhizomagastrodiae_C368-T10_good_124.750
SRP279888GastroGastrodia elata tuber 27.97
JuvenJuvenile tuber16.49
Mother_GastroMother tuber of Gastrodia elata 15.26
Mother_JuvenMother tuber of Juvenile 10.49