Detail information of GWHGAAEX005646/evm.TU.scaffold_168.66


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG08890Histone acetyltransferase SAGA, TRRAP/TRA1 component, PI-3 kinase superfamily
nrgi|743846601|ref|XP_010938880.1|0PREDICTED: transformation/transcription domain-associated protein-like isoform X1 [Elaeis guineensis]
trEMBLtr|F6GWN0|F6GWN0_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CCB44365.1}
TAIRAT2G179300Phosphatidylinositol 3- and 4-kinase family protein with FAT domain

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000017318152101884914-
Transcript Sequence

Network for GWHGAAEX005646

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module8

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02259.22FAT282031583.90E-40
PF00454.26PI3_PI4_kinase356638122.10E-26
PF02260.19FATC386838997.40E-07
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005515Molecular Functionprotein binding
GO:0016301Molecular Functionkinase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms54.400
SRR2545915Juvenile tuber38.520
SRP108465SRR5643513five period of Gastrodia elata8.540
SRR5643514five period of Gastrodia elata10.460
SRR5643515five period of Gastrodia elata9.760
SRR5643524five period of Gastrodia elata9.930
SRR5643525five period of Gastrodia elata6.570
SRR5643528five period of Gastrodia elata4.480
SRR5643658five period of Gastrodia elata6.020
SRR5643659five period of Gastrodia elata9.010
SRR5643660five period of Gastrodia elata12.130
SRR5643661five period of Gastrodia elata7.930
SRR5643662five period of Gastrodia elata8.030
SRR5643663five period of Gastrodia elata9.910
SRR5643664five period of Gastrodia elata11.360
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_114.890
SRR6049655Rhizomagastrodiae_C368-T10_good_111.470
SRR6049656Rhizomagastrodiae_C368-T07_good_113.700
SRR6049657Rhizomagastrodiae_C368-T07_good_115.160
SRR6049658Rhizomagastrodiae_C368-T04_good_117.280
SRR6049659Rhizomagastrodiae_C368-T04_good_118.930
SRR6049660Rhizomagastrodiae_C368-T01_good_117.270
SRR6049661Rhizomagastrodiae_C368-T04_good_118.460
SRR6049662Rhizomagastrodiae_C368-T01_good_110.960
SRR6049663Rhizomagastrodiae_C368-T01_good_114.800
SRR6049664Rhizomagastrodiae_C368-T10_good_19.510
SRR6049665Rhizomagastrodiae_C368-T10_good_19.510
SRP279888GastroGastrodia elata tuber 14.89
JuvenJuvenile tuber17.82
Mother_GastroMother tuber of Gastrodia elata 8.17
Mother_JuvenMother tuber of Juvenile 15.01