Gene detail

Detail information of GWHGAAEX005647/evm.TU.scaffold_168.69

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|337748701\|ref\|YP_004642863.1\|	6.00E-25	alpha/beta hydrolase [Paenibacillus mucilaginosus KNP414]
KOG	KOG1515	0	Arylacetamide deacetylase
nr	gi\|743865467\|ref\|XP_010904836.1\|	0	PREDICTED: gibberellin receptor GID1C-like [Elaeis guineensis]
Swissprot	tr\|Q940G6\|GID1C_ARATH	0	Gibberellin receptor GID1C
trEMBL	tr\|A0A067JI60\|A0A067JI60_JATCU	0	Uncharacterized protein {ECO:0000313\|EMBL:KDP23572.1}
TAIR	AT5G27320	0	alpha/beta-Hydrolases superfamily protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000173	1970373	1973011	+

Transcript Sequence
>GWHTAAEX005647 AAAAAAGATAATTCAAAATTATATGATTTAAATTGAATTAAACTAACAATTAATTAGGCTAAATAGACTATTAGATAAGCTTAAATTCAAAGTGAACAGGCGCTCATCCTCTTTAAATAAGAAAATAAAAACGTTCACACCGAACGTTATCTTATTCGACGAAATTTCGCCAGTGGAAAGAAAGTGGGTCCCAAGCAGCAGTTTATTATGACGGAGCCGCCCAGCTTTGTCGTTTCTCTCCGTCTTTCATTGCTACCGTCTTCTTTCTCACACCCACAGTCTCTCTCTTCCTGTGCTCTTATTCTCTCTCCTCCCTTTGGCTCCTCTCATCATCCATAGGCTCGCGTGCTGCCCTCTCTGTCCTCTTCTTAACCTCCTCCTTCGCCCCCTCCTTTTCGCCCCTCTTCTTCTGCCCAAGGACTGACGGTTCAGACTTGAAACTCTAAAGAAAAGCCCCGGTCGATCCCAGCAGAGGAACCGCAGGATCGGCCTGAAGAAAGGCTGCAGGGCGCTGTGCTTCTTGGATTTTGCCGGCGGCTTTAATCTCCGGGACATTTTTCGAAGCTGCCGCCTTGTTCTAGATTCTTGCGGCTCATCGTTGTTTTTCTTAGAGGTTTCACCATGGCGGGAGGCAACGAGGTTAATGCGAACGAGTCCAAGATGGTGGTTCCCCTTAACACCTTTGTTCTGATATCTAACTTCAAGCTTGCCTACAACATGCTTCGGCGTCCTGATGGCAGCTTCGACCGCCACCTTGCTGAATTCTTAGACCGGAAAGTTCAGGCCAATGCTTCTCCTGTCAATGGTGTTGTCTCCTTTGATCGAATTCTAGACCGCCAGACCAATCTGCTTGCTCGGATTTACCGCCCGGCGCCCGCTCCTTCATATGCTGAGCTCCCCCATATTGCTGCCATTTATGAGCTACAGAAAGCCCCCTCTGCGGATGCTTTTCCGGTGATCATCTTCTTCCATGGCGGCAGCTTTGCGCACTCCACTTCGAGCAGCGCTATCTACGATACTCTGTGCCGCCGCTTCGTGACTCTCTGTGGCGGCGCGGTGGTCATTTCCGTCGACTATCGGAGATCCCCAGAGCATCGTTATCCTTGTGCTTATGATGATGGCTGGACTGCCCTCAAGTGGGCCTCTTCCCAGCAATGGCTCCACAGCGGCAAGGATGCCAAGCTGCGAGTTTTTCTTGCTGGCGATAGCTCCGGGGGCAACATAGTTCACCATGTCGCAGTTAGGGCCGTGGAGTCTGGAATCCACGTCTTAGGAAACATCCTGCTTAATCCATTGTTTGGAGGGAATGAGCGAACAGAGTCTGAGTTGAAGTTGGATGGGAAGTATTTTGTTGGATTGCAGGATAGGGATTGGTATTGGAGAGCATTCCTGCCTGAGGGTGCTGATAGGGATCACCCGGCTTGTAATCCTTTCGGTCCTAATGGTGCTAAGCTGGAGGGGCTTCCTTTTCCGAAGACGCTTCTTGTCGTGGCAAGTTTGGACTTGACTCAGGATTGGCAGCTTGCGTACGAGGAAGGGTTGAAGAAGGCTGGGCATGAAGTGCGGCTTCTCTACAGGGAGCAGGCAACGATAGGTTTTTACTTCCTTCCAAACACAAACCACTACCATGAAGTCATGGAGGAGATCAGAAACTTTGTGAGGTCTGATTTGTGAGAAAGGAGAAGCCTTGTTGCACAGGGTATACCAAAAAAGTATATATGTGATTTTAGCATCTCTCTCCCTCTTTATGTATACATATATATGTGTATGTATGTATGTATGTAGGTGTTGGATTTCTTCTTAATGCTTTGTTTGGAGATGTGGCTTGTTTCTTTTGGAGGGAAATGGAAGGGGATTTATGTGATTTCTAGACAGTAGCACAAGAAGAAAATTTGATGAAACTGAGATTAGGTACTAGAGCTGCAGTTTTTTCTTATTGTTTATGTATGGTGTTTTTTAGAGGATTGGCCAAGTATGGAAGAGAACTAAACTGAATGCAATTGCTGCGGTTGATCCTGTACTGCTAATATTGCTAACAAAAATACTTTTAGTGACAAATGTTCATGTTCTTGCGCCATTTTAGCTGTTGATTGTAGCAAAATCTGTTGCTTAGCAATAAAATTTTTACATGTAGTTATTCCTTCAATTTTCTTATTGTGTGATGTTTACATGTAACCTTGCTTTAAAATTTTCTGCTCTTTATAGTGTGTAGCCTACAGCAAAACTTCATATTTTGT

Network for GWHGAAEX005647

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF07859.12	Abhydrolase_3	113	327	6.70E-54

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K14493	GID1	Plant hormone signal transduction	map04075

Gene Ontology

GO term	Ontology	Name
GO:0016787	Molecular Function	hydrolase activity

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	44.340
SRP064423	SRR2545915	Juvenile tuber	31.340
SRP108465	SRR5643513	five period of Gastrodia elata	65.270
	SRR5643514	five period of Gastrodia elata	47.050
	SRR5643515	five period of Gastrodia elata	55.870
	SRR5643524	five period of Gastrodia elata	58.460
	SRR5643525	five period of Gastrodia elata	46.060
	SRR5643528	five period of Gastrodia elata	46.460
	SRR5643658	five period of Gastrodia elata	41.170
	SRR5643659	five period of Gastrodia elata	27.220
	SRR5643660	five period of Gastrodia elata	19.000
	SRR5643661	five period of Gastrodia elata	23.630
	SRR5643662	five period of Gastrodia elata	24.330
	SRR5643663	five period of Gastrodia elata	18.200
	SRR5643664	five period of Gastrodia elata	26.030
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	44.300
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	48.920
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	51.310
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	42.980
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	59.200
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	69.390
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	47.520
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	45.940
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	61.660
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	60.950
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	67.410
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	67.410
SRP279888	Gastro	Gastrodia elata tuber	26.84
	Juven	Juvenile tuber	44.13
	Mother_Gastro	Mother tuber of Gastrodia elata	66.85
	Mother_Juven	Mother tuber of Juvenile	44.49