Detail information of GWHGAAEX005650/evm.TU.scaffold_168.72


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|189220378|ref|YP_001941018.1|7.00E-06Acetolactate synthase large subunit or other thiamine pyrophosphate-requiring enzyme [Methylacidiphilum infernorum V4]
KOGKOG41662.00E-10Thiamine pyrophosphate-requiring enzyme
nrgi|549065297|dbj|BAN92371.1|1.39E-14acetolactate synthase, partial [Schoenoplectiella wallichii]
Swissprottr|P09114|ILVB2_TOBAC1.00E-13Acetolactate synthase 2, chloroplastic (Precursor)
trEMBLtr|U3TJ10|U3TJ10_9POAL5.00E-15Acetolactate synthase {ECO:0000313|EMBL:BAN92371.1} (Fragment)
TAIRAT3G485602.00E-10chlorsulfuron/imidazolinone resistant 1

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000017320167342024787-
Transcript Sequence

Network for GWHGAAEX005650

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K01652E2.2.1.6L, ilvB, ilvG, ilvI Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Biosynthesis of antibioticsmap01130
2-Oxocarboxylic acid metabolismmap01210
Biosynthesis of amino acidsmap01230
Butanoate metabolismmap00650
C5-Branched dibasic acid metabolismmap00660
Cysteine and methionine metabolismmap00270
Pantothenate and CoA biosynthesismap00770

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms8.710
SRR2545915Juvenile tuber10.520
SRP108465SRR5643513five period of Gastrodia elata1.720
SRR5643514five period of Gastrodia elata2.020
SRR5643515five period of Gastrodia elata1.390
SRR5643524five period of Gastrodia elata1.490
SRR5643525five period of Gastrodia elata8.140
SRR5643528five period of Gastrodia elata9.750
SRR5643658five period of Gastrodia elata9.850
SRR5643659five period of Gastrodia elata3.540
SRR5643660five period of Gastrodia elata3.870
SRR5643661five period of Gastrodia elata4.810
SRR5643662five period of Gastrodia elata6.610
SRR5643663five period of Gastrodia elata3.980
SRR5643664five period of Gastrodia elata6.500
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_11.310
SRR6049655Rhizomagastrodiae_C368-T10_good_12.120
SRR6049656Rhizomagastrodiae_C368-T07_good_11.800
SRR6049657Rhizomagastrodiae_C368-T07_good_12.290
SRR6049658Rhizomagastrodiae_C368-T04_good_12.930
SRR6049659Rhizomagastrodiae_C368-T04_good_12.700
SRR6049660Rhizomagastrodiae_C368-T01_good_12.170
SRR6049661Rhizomagastrodiae_C368-T04_good_11.370
SRR6049662Rhizomagastrodiae_C368-T01_good_11.490
SRR6049663Rhizomagastrodiae_C368-T01_good_11.670
SRR6049664Rhizomagastrodiae_C368-T10_good_12.990
SRR6049665Rhizomagastrodiae_C368-T10_good_12.990
SRP279888GastroGastrodia elata tuber 2.53
JuvenJuvenile tuber1.22
Mother_GastroMother tuber of Gastrodia elata 2.85
Mother_JuvenMother tuber of Juvenile 1.54