Detail information of GWHGAAEX005657/evm.TU.scaffold_169.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|296102977|ref|YP_003613123.1|2.00E-61TrpR binding protein WrbA [Enterobacter cloacae subsp. cloacae ATCC 13047]
KOGKOG31352.00E-1161,4-benzoquinone reductase-like; Trp repressor binding protein-like/protoplast-secreted protein
nrgi|89276317|gb|ABD66515.1|5.53E-121quinone oxidoreductase [Gymnadenia conopsea]
Swissprottr|Q9LSQ5|FQR1_ARATH5.00E-117NAD(P)H dehydrogenase (quinone) FQR1 {ECO:0000305}
trEMBLtr|Q207T5|Q207T5_GYMCO2.00E-121Quinone oxidoreductase {ECO:0000313|EMBL:ABD66515.1}
TAIRAT5G545002.00E-116flavodoxin-like quinone reductase 1

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000001624917761623+
Transcript Sequence

Network for GWHGAAEX005657

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03358.14FMN_red571855.40E-11
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K03809wrbA Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Ubiquinone and other terpenoid-quinone biosynthesismap00130

Gene Ontology

GO term OntologyName
GO:0016491Molecular Functionoxidoreductase activity
GO:0010181Molecular FunctionFMN binding
GO:0003955Molecular FunctionNAD(P)H dehydrogenase (quinone) activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms1182.090
SRR2545915Juvenile tuber1244.370
SRP108465SRR5643513five period of Gastrodia elata823.030
SRR5643514five period of Gastrodia elata1088.510
SRR5643515five period of Gastrodia elata787.610
SRR5643524five period of Gastrodia elata981.280
SRR5643525five period of Gastrodia elata1234.070
SRR5643528five period of Gastrodia elata1243.690
SRR5643658five period of Gastrodia elata1829.950
SRR5643659five period of Gastrodia elata696.380
SRR5643660five period of Gastrodia elata802.650
SRR5643661five period of Gastrodia elata894.040
SRR5643662five period of Gastrodia elata1027.330
SRR5643663five period of Gastrodia elata1002.880
SRR5643664five period of Gastrodia elata1158.130
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_11086.780
SRR6049655Rhizomagastrodiae_C368-T10_good_1564.410
SRR6049656Rhizomagastrodiae_C368-T07_good_11107.350
SRR6049657Rhizomagastrodiae_C368-T07_good_1998.860
SRR6049658Rhizomagastrodiae_C368-T04_good_11045.960
SRR6049659Rhizomagastrodiae_C368-T04_good_11017.180
SRR6049660Rhizomagastrodiae_C368-T01_good_1872.590
SRR6049661Rhizomagastrodiae_C368-T04_good_1971.690
SRR6049662Rhizomagastrodiae_C368-T01_good_1873.080
SRR6049663Rhizomagastrodiae_C368-T01_good_1825.720
SRR6049664Rhizomagastrodiae_C368-T10_good_11092.890
SRR6049665Rhizomagastrodiae_C368-T10_good_11092.890
SRP279888GastroGastrodia elata tuber 1,311.24
JuvenJuvenile tuber794.18
Mother_GastroMother tuber of Gastrodia elata 425.09
Mother_JuvenMother tuber of Juvenile 645.38