Detail information of GWHGAAEX005665/evm.TU.scaffold_169.23


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|88657591|ref|YP_507009.1|9.00E-08NADH:ubiquinone oxidoreductase family protein [Ehrlichia chaffeensis str. Arkansas]
nrgi|672188318|ref|XP_008813556.1|1.06E-75PREDICTED: uncharacterized protein LOC103724162 [Phoenix dactylifera]
trEMBLtr|K7MQW2|K7MQW2_SOYBN2.00E-68Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA18G10960.2}
TAIRHS147303324.00E-07Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000016216715251700053-
Transcript Sequence

Network for GWHGAAEX005665

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF05071.15NDUFA1216947.00E-13
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K18160NDUFAF2 Thermogenesis map04714

Gene Ontology

GO term OntologyName
GO:0008137Molecular FunctionNADH dehydrogenase (ubiquinone) activity
GO:0009055Molecular Functionelectron carrier activity
GO:0016020Cellular Componentmembrane

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms41.720
SRR2545915Juvenile tuber89.160
SRP108465SRR5643513five period of Gastrodia elata85.370
SRR5643514five period of Gastrodia elata99.000
SRR5643515five period of Gastrodia elata86.550
SRR5643524five period of Gastrodia elata86.650
SRR5643525five period of Gastrodia elata55.440
SRR5643528five period of Gastrodia elata57.440
SRR5643658five period of Gastrodia elata70.990
SRR5643659five period of Gastrodia elata92.180
SRR5643660five period of Gastrodia elata90.080
SRR5643661five period of Gastrodia elata90.430
SRR5643662five period of Gastrodia elata89.530
SRR5643663five period of Gastrodia elata101.870
SRR5643664five period of Gastrodia elata90.050
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_161.420
SRR6049655Rhizomagastrodiae_C368-T10_good_1116.450
SRR6049656Rhizomagastrodiae_C368-T07_good_168.050
SRR6049657Rhizomagastrodiae_C368-T07_good_157.740
SRR6049658Rhizomagastrodiae_C368-T04_good_157.310
SRR6049659Rhizomagastrodiae_C368-T04_good_153.540
SRR6049660Rhizomagastrodiae_C368-T01_good_155.860
SRR6049661Rhizomagastrodiae_C368-T04_good_157.780
SRR6049662Rhizomagastrodiae_C368-T01_good_155.810
SRR6049663Rhizomagastrodiae_C368-T01_good_158.430
SRR6049664Rhizomagastrodiae_C368-T10_good_174.250
SRR6049665Rhizomagastrodiae_C368-T10_good_174.250
SRP279888GastroGastrodia elata tuber 124.35
JuvenJuvenile tuber96.61
Mother_GastroMother tuber of Gastrodia elata 49.97
Mother_JuvenMother tuber of Juvenile 74.09