Detail information of GWHGAAEX005668/evm.TU.scaffold_169.28
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| KOG | KOG0242 | 1.00E-161 | Kinesin-like protein |
| nr | gi|641824836|gb|KDO44142.1| | 0 | hypothetical protein CISIN_1g005372mg [Citrus sinensis] |
| Swissprot | tr|P82266|K125_ARATH | 5.00E-45 | Probable 125 kDa kinesin-related protein |
| trEMBL | tr|M0T4A3|M0T4A3_MUSAM | 0 | Kinesin-like protein {ECO:0000256|RuleBase:RU000394} |
| TAIR | AT5G02370 | 1.00E-161 | ATP binding microtubule motor family protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000162 | 1844699 | 1867127 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX005668
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module8 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00225.22 | Kinesin | 34 | 342 | 2.70E-81 |
| PF12836.6 | HHH_3 | 542 | 590 | 2.70E-06 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K10403 | KIF22 | Progesterone-mediated oocyte maturation | map04914 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0007018 | Biological Process | microtubule-based movement |
| GO:0005524 | Molecular Function | ATP binding |
| GO:0003777 | Molecular Function | microtubule motor activity |
| GO:0008017 | Molecular Function | microtubule binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 8.690 |
| SRR2545915 | Juvenile tuber | 16.270 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 2.300 |
| SRR5643514 | five period of Gastrodia elata | 3.010 | |
| SRR5643515 | five period of Gastrodia elata | 1.820 | |
| SRR5643524 | five period of Gastrodia elata | 2.260 | |
| SRR5643525 | five period of Gastrodia elata | 0.070 | |
| SRR5643528 | five period of Gastrodia elata | 0.110 | |
| SRR5643658 | five period of Gastrodia elata | 0.030 | |
| SRR5643659 | five period of Gastrodia elata | 1.680 | |
| SRR5643660 | five period of Gastrodia elata | 1.270 | |
| SRR5643661 | five period of Gastrodia elata | 2.370 | |
| SRR5643662 | five period of Gastrodia elata | 1.700 | |
| SRR5643663 | five period of Gastrodia elata | 1.140 | |
| SRR5643664 | five period of Gastrodia elata | 1.440 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 1.830 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 1.860 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 2.210 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 3.050 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 1.610 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 1.150 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 1.900 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 3.600 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 4.980 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 2.500 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 1.290 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 1.290 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 6.97 |
| Juven | Juvenile tuber | 2.53 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 1.00 | |
| Mother_Juven | Mother tuber of Juvenile | 1.52 |