Detail information of GWHGAAEX005671/evm.TU.scaffold_169.32


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743773527|ref|XP_010917110.1|6.06E-27PREDICTED: uncharacterized protein LOC105041779 [Elaeis guineensis]
trEMBLtr|A0A087GRC4|A0A087GRC4_ARAAL1.00E-26Uncharacterized protein {ECO:0000313|EMBL:KFK32426.1}
TAIRAT2G270802.00E-26Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000016221287102129465+
Transcript Sequence

Network for GWHGAAEX005671

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms1.090
SRR2545915Juvenile tuber0.680
SRP108465SRR5643513five period of Gastrodia elata0.920
SRR5643514five period of Gastrodia elata0.590
SRR5643515five period of Gastrodia elata0.120
SRR5643524five period of Gastrodia elata0.540
SRR5643525five period of Gastrodia elata1.200
SRR5643528five period of Gastrodia elata0.800
SRR5643658five period of Gastrodia elata2.610
SRR5643659five period of Gastrodia elata1.280
SRR5643660five period of Gastrodia elata1.750
SRR5643661five period of Gastrodia elata2.020
SRR5643662five period of Gastrodia elata0.940
SRR5643663five period of Gastrodia elata1.160
SRR5643664five period of Gastrodia elata1.410
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_11.460
SRR6049655Rhizomagastrodiae_C368-T10_good_12.790
SRR6049656Rhizomagastrodiae_C368-T07_good_11.720
SRR6049657Rhizomagastrodiae_C368-T07_good_12.670
SRR6049658Rhizomagastrodiae_C368-T04_good_14.550
SRR6049659Rhizomagastrodiae_C368-T04_good_12.470
SRR6049660Rhizomagastrodiae_C368-T01_good_11.840
SRR6049661Rhizomagastrodiae_C368-T04_good_12.510
SRR6049662Rhizomagastrodiae_C368-T01_good_11.040
SRR6049663Rhizomagastrodiae_C368-T01_good_11.110
SRR6049664Rhizomagastrodiae_C368-T10_good_10.560
SRR6049665Rhizomagastrodiae_C368-T10_good_10.560
SRP279888GastroGastrodia elata tuber 3.02
JuvenJuvenile tuber1.82
Mother_GastroMother tuber of Gastrodia elata 1.00
Mother_JuvenMother tuber of Juvenile 1.43