Detail information of GWHGAAEX005674/evm.TU.scaffold_17.3


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|193215022|ref|YP_001996221.1|4.00E-20hypothetical protein Ctha_1311 [Chloroherpeton thalassium ATCC 35110]
KOGKOG18401.00E-143Kinesin light chain
nrgi|743771407|ref|XP_010915990.1|0PREDICTED: uncharacterized protein LOC105040930 isoform X2 [Elaeis guineensis]
trEMBLtr|M0S869|M0S869_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr2P15280_001}
TAIRAT5G530801.00E-143Tetratricopeptide repeat (TPR)-like superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001852365125930-
Transcript Sequence

Network for GWHGAAEX005674

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13424.5TPR_123514204.50E-10
PF13374.5TPR_104364705.20E-06
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005515Molecular Functionprotein binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms1.380
SRR2545915Juvenile tuber0.930
SRP108465SRR5643513five period of Gastrodia elata2.150
SRR5643514five period of Gastrodia elata2.210
SRR5643515five period of Gastrodia elata2.150
SRR5643524five period of Gastrodia elata2.660
SRR5643525five period of Gastrodia elata1.750
SRR5643528five period of Gastrodia elata1.060
SRR5643658five period of Gastrodia elata1.110
SRR5643659five period of Gastrodia elata2.250
SRR5643660five period of Gastrodia elata1.550
SRR5643661five period of Gastrodia elata1.980
SRR5643662five period of Gastrodia elata1.220
SRR5643663five period of Gastrodia elata1.440
SRR5643664five period of Gastrodia elata0.900
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_13.610
SRR6049655Rhizomagastrodiae_C368-T10_good_11.900
SRR6049656Rhizomagastrodiae_C368-T07_good_13.160
SRR6049657Rhizomagastrodiae_C368-T07_good_12.060
SRR6049658Rhizomagastrodiae_C368-T04_good_12.990
SRR6049659Rhizomagastrodiae_C368-T04_good_12.540
SRR6049660Rhizomagastrodiae_C368-T01_good_12.430
SRR6049661Rhizomagastrodiae_C368-T04_good_13.020
SRR6049662Rhizomagastrodiae_C368-T01_good_15.420
SRR6049663Rhizomagastrodiae_C368-T01_good_14.040
SRR6049664Rhizomagastrodiae_C368-T10_good_13.340
SRR6049665Rhizomagastrodiae_C368-T10_good_13.340
SRP279888GastroGastrodia elata tuber 1.41
JuvenJuvenile tuber0.84
Mother_GastroMother tuber of Gastrodia elata 0.38
Mother_JuvenMother tuber of Juvenile 0.53