Detail information of GWHGAAEX005675/evm.TU.scaffold_17.4


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG24095.00E-84KRR1-interacting protein involved in 40S ribosome biogenesis
nrgi|672126598|ref|XP_008786756.1|0PREDICTED: LOW QUALITY PROTEIN: protein KRI1 homolog [Phoenix dactylifera]
trEMBLtr|M0RPP7|M0RPP7_MUSAM3.00E-173Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr11P05670_001}
TAIRAT3G240805.00E-84KRR1 family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000018144936161343+
Transcript Sequence

Network for GWHGAAEX005675

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF05178.11Kri13094073.80E-19
PF12936.6Kri1_C4605435.90E-28
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms23.180
SRR2545915Juvenile tuber29.480
SRP108465SRR5643513five period of Gastrodia elata19.840
SRR5643514five period of Gastrodia elata16.510
SRR5643515five period of Gastrodia elata17.550
SRR5643524five period of Gastrodia elata18.690
SRR5643525five period of Gastrodia elata11.400
SRR5643528five period of Gastrodia elata17.050
SRR5643658five period of Gastrodia elata11.940
SRR5643659five period of Gastrodia elata23.820
SRR5643660five period of Gastrodia elata22.080
SRR5643661five period of Gastrodia elata22.250
SRR5643662five period of Gastrodia elata19.260
SRR5643663five period of Gastrodia elata20.280
SRR5643664five period of Gastrodia elata20.470
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_116.940
SRR6049655Rhizomagastrodiae_C368-T10_good_117.820
SRR6049656Rhizomagastrodiae_C368-T07_good_118.670
SRR6049657Rhizomagastrodiae_C368-T07_good_117.750
SRR6049658Rhizomagastrodiae_C368-T04_good_116.850
SRR6049659Rhizomagastrodiae_C368-T04_good_118.650
SRR6049660Rhizomagastrodiae_C368-T01_good_117.200
SRR6049661Rhizomagastrodiae_C368-T04_good_116.470
SRR6049662Rhizomagastrodiae_C368-T01_good_114.840
SRR6049663Rhizomagastrodiae_C368-T01_good_116.090
SRR6049664Rhizomagastrodiae_C368-T10_good_118.730
SRR6049665Rhizomagastrodiae_C368-T10_good_118.730
SRP279888GastroGastrodia elata tuber 17.16
JuvenJuvenile tuber20.39
Mother_GastroMother tuber of Gastrodia elata 11.71
Mother_JuvenMother tuber of Juvenile 18.55