Detail information of GWHGAAEX005683/evm.TU.scaffold_17.14


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|590691037|ref|XP_007043672.1|1.25E-11Nuclear fusion defective 6 isoform 2 [Theobroma cacao]
trEMBLtr|A0A061EB28|A0A061EB28_THECC5.00E-12Nuclear fusion defective 6 isoform 2 {ECO:0000313|EMBL:EOX99503.1}

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000018396188419115+
Transcript Sequence

Network for GWHGAAEX005683

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms16.330
SRR2545915Juvenile tuber17.870
SRP108465SRR5643513five period of Gastrodia elata33.690
SRR5643514five period of Gastrodia elata37.320
SRR5643515five period of Gastrodia elata29.960
SRR5643524five period of Gastrodia elata38.610
SRR5643525five period of Gastrodia elata23.090
SRR5643528five period of Gastrodia elata28.460
SRR5643658five period of Gastrodia elata25.530
SRR5643659five period of Gastrodia elata37.910
SRR5643660five period of Gastrodia elata38.350
SRR5643661five period of Gastrodia elata46.600
SRR5643662five period of Gastrodia elata34.720
SRR5643663five period of Gastrodia elata39.960
SRR5643664five period of Gastrodia elata35.930
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_130.690
SRR6049655Rhizomagastrodiae_C368-T10_good_144.620
SRR6049656Rhizomagastrodiae_C368-T07_good_138.550
SRR6049657Rhizomagastrodiae_C368-T07_good_124.630
SRR6049658Rhizomagastrodiae_C368-T04_good_131.860
SRR6049659Rhizomagastrodiae_C368-T04_good_137.940
SRR6049660Rhizomagastrodiae_C368-T01_good_130.860
SRR6049661Rhizomagastrodiae_C368-T04_good_130.470
SRR6049662Rhizomagastrodiae_C368-T01_good_138.720
SRR6049663Rhizomagastrodiae_C368-T01_good_138.530
SRR6049664Rhizomagastrodiae_C368-T10_good_136.950
SRR6049665Rhizomagastrodiae_C368-T10_good_136.950
SRP279888GastroGastrodia elata tuber 31.46
JuvenJuvenile tuber15.91
Mother_GastroMother tuber of Gastrodia elata 15.77
Mother_JuvenMother tuber of Juvenile 13.99