Detail information of GWHGAAEX005690/evm.TU.scaffold_17.21


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|116750628|ref|YP_847315.1|7.00E-64class IV aminotransferase [Syntrophobacter fumaroxidans MPOB]
KOGKOG09751.00E-121Branched chain aminotransferase BCAT1, pyridoxal phosphate enzymes type IV superfamily
nrgi|672120068|ref|XP_008783289.1|0PREDICTED: branched-chain-amino-acid aminotransferase-like protein 3, chloroplastic [Phoenix dactylifera]
Swissprottr|Q8L493|DAAA_ARATH2.00E-125D-amino-acid transaminase, chloroplastic {ECO:0000303|PubMed:18318836} (Precursor)
trEMBLtr|I3SWY2|I3SWY2_LOTJA1.00E-175Uncharacterized protein {ECO:0000313|EMBL:AFK44774.1}
TAIRAT5G578501.00E-121D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000018654552672392-
Transcript Sequence

Network for GWHGAAEX005690

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01063.18Aminotran_4773031.80E-40
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K18482ADCL Folate biosynthesis map00790

Gene Ontology

GO term OntologyName
GO:0003824Molecular Functioncatalytic activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms19.710
SRR2545915Juvenile tuber17.820
SRP108465SRR5643513five period of Gastrodia elata13.680
SRR5643514five period of Gastrodia elata17.210
SRR5643515five period of Gastrodia elata20.040
SRR5643524five period of Gastrodia elata18.470
SRR5643525five period of Gastrodia elata19.550
SRR5643528five period of Gastrodia elata41.820
SRR5643658five period of Gastrodia elata18.740
SRR5643659five period of Gastrodia elata17.300
SRR5643660five period of Gastrodia elata16.540
SRR5643661five period of Gastrodia elata22.800
SRR5643662five period of Gastrodia elata18.670
SRR5643663five period of Gastrodia elata18.750
SRR5643664five period of Gastrodia elata14.280
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_117.930
SRR6049655Rhizomagastrodiae_C368-T10_good_124.960
SRR6049656Rhizomagastrodiae_C368-T07_good_118.490
SRR6049657Rhizomagastrodiae_C368-T07_good_115.760
SRR6049658Rhizomagastrodiae_C368-T04_good_115.550
SRR6049659Rhizomagastrodiae_C368-T04_good_114.990
SRR6049660Rhizomagastrodiae_C368-T01_good_115.420
SRR6049661Rhizomagastrodiae_C368-T04_good_116.520
SRR6049662Rhizomagastrodiae_C368-T01_good_123.230
SRR6049663Rhizomagastrodiae_C368-T01_good_121.330
SRR6049664Rhizomagastrodiae_C368-T10_good_125.040
SRR6049665Rhizomagastrodiae_C368-T10_good_125.040
SRP279888GastroGastrodia elata tuber 13.73
JuvenJuvenile tuber11.78
Mother_GastroMother tuber of Gastrodia elata 19.26
Mother_JuvenMother tuber of Juvenile 13.92