Detail information of GWHGAAEX005694/evm.TU.scaffold_17.25


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG41663.00E-08Thiamine pyrophosphate-requiring enzyme
nrgi|116309349|emb|CAH66432.1|9.24E-09OSIGBa0096P03.6 [Oryza sativa Indica Group]
Swissprottr|Q7XKQ8|ILVB2_ORYSJ5.00E-11Probable acetolactate synthase 2, chloroplastic (Precursor)
trEMBLtr|Q01LD9|Q01LD9_ORYSA3.00E-09OSIGBa0096P03.6 protein {ECO:0000313|EMBL:CAH66432.1}
TAIRAT3G485603.00E-08chlorsulfuron/imidazolinone resistant 1

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000018721691728842-
Transcript Sequence

Network for GWHGAAEX005694

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K01652E2.2.1.6L, ilvB, ilvG, ilvI Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Biosynthesis of antibioticsmap01130
2-Oxocarboxylic acid metabolismmap01210
Biosynthesis of amino acidsmap01230
Butanoate metabolismmap00650
C5-Branched dibasic acid metabolismmap00660
Cysteine and methionine metabolismmap00270
Pantothenate and CoA biosynthesismap00770

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms4.540
SRR2545915Juvenile tuber4.600
SRP108465SRR5643513five period of Gastrodia elata1.170
SRR5643514five period of Gastrodia elata2.010
SRR5643515five period of Gastrodia elata2.640
SRR5643524five period of Gastrodia elata2.730
SRR5643525five period of Gastrodia elata3.640
SRR5643528five period of Gastrodia elata3.390
SRR5643658five period of Gastrodia elata4.220
SRR5643659five period of Gastrodia elata1.620
SRR5643660five period of Gastrodia elata2.230
SRR5643661five period of Gastrodia elata1.960
SRR5643662five period of Gastrodia elata1.950
SRR5643663five period of Gastrodia elata2.610
SRR5643664five period of Gastrodia elata1.380
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_10.800
SRR6049655Rhizomagastrodiae_C368-T10_good_14.780
SRR6049656Rhizomagastrodiae_C368-T07_good_13.080
SRR6049657Rhizomagastrodiae_C368-T07_good_11.330
SRR6049658Rhizomagastrodiae_C368-T04_good_11.520
SRR6049659Rhizomagastrodiae_C368-T04_good_11.610
SRR6049660Rhizomagastrodiae_C368-T01_good_10.530
SRR6049661Rhizomagastrodiae_C368-T04_good_12.130
SRR6049662Rhizomagastrodiae_C368-T01_good_12.720
SRR6049663Rhizomagastrodiae_C368-T01_good_11.210
SRR6049664Rhizomagastrodiae_C368-T10_good_12.360
SRR6049665Rhizomagastrodiae_C368-T10_good_12.360
SRP279888GastroGastrodia elata tuber 0.16
JuvenJuvenile tuber1.28
Mother_GastroMother tuber of Gastrodia elata 0.21
Mother_JuvenMother tuber of Juvenile 0.24