Gene detail

Detail information of GWHGAAEX005695/evm.TU.scaffold_17.27

Functional Annotation

Database	Orthologs	Annotation
KOG	KOG2374	Uncharacterized conserved protein
nr	gi\|672119897\|ref\|XP_008783200.1\|	PREDICTED: UV-stimulated scaffold protein A homolog [Phoenix dactylifera]
Swissprot	tr\|Q9M358\|UVSSA_ARATH	UV-stimulated scaffold protein A homolog
trEMBL	tr\|M0TQV2\|M0TQV2_MUSAM	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr8P15990_001}
TAIR	AT3G61800	Unannotated protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000018	722073	735358	+

Transcript Sequence
>GWHTAAEX005695 CTTCATCATTGCCGCAATTTGGGTGCTCTCAGAAGTGTGTGGATTGAGATGCCACCTCCTGCCGAGGTAACGACGCCGAGATTGATCGAGAAGGCGACGAACTCGACGGCTCAGGAAGTTGACCCTCGCATCCTCAAGGGCATCAAATCGGCCGCCCGCTTCTCCGATGAGGAAATTCTCGCCTCAGTAGATGCTCTCATGGACCAAATGAAGAAGCCCCATTCCCAGGTGCGCTACCTTGCAGTTCTTATTGTTGATGAATTGTTCATGCGTTCAAAACTTTTCAGAAGCCAATTTGTAGTCAATTTGGATCAATTCTTGAGTCTAAGTGTTGGTTTTAAGAAAAAACTTCCTCTGCCGCCTCCTCCTATAATCGCCACAAATTTACGCTCCAAGAGCATAGAATTATTGGAGAAATGGAATGCTTCTTTTGGAATCCATTACAAACAACTAAGGTTGGGCTTTGATTACCTAAAGGATACACTAAGGTATCAGTTTCCAAATCGTCTCGAAAATGAAGCTCGGCTGCAACAGGAAAGAAGGGAAAGGCAGGCCAAAACAATGCAAATTCTGCTCAATAAATTTGAACACCTGAAAGAAAACTTTAGCTCCATCAAATCTGATATTCGGTCCACAATTGATGAAATAGAAGAATGTTTGGAAATTGCTAATGTGAGAGAAGGAAACCCTCTTGAATTCTCTGGGGATGCTGATGAGGTTGAAGTATTGAACTCTTTTTCATTGCGGCAAATTCGTCTTGAATCTTTAAAGGAGGGAGGGAAACTTCAGGAAAACAGTGAAAACAAGGCTATCTTTGACGCATTAAGGGAATCATACAAACTACTTATCTCAAAACATTTGCCATCTGTTCATGAGTGGTTGTCTGTTCTTGTTAGAGTTGATGCAACTGATAATAAATTCAGAGATGGTGCATTGAAAGAACTTATTGATTTTCGCAATCTCATTCATTCACTTGAGAAAAAATGCAAGGAATTTGGCATTACTCTTGATCTAAATTTCACTCAGAAAGAAGATGAAGATTTGTGGGAAGAGGGTAAAGTTGAGGCTTACAAGCCTGCGGATAATACCAGTGCTTCCTCGAGTGCACTTGAAAACTTCGTCACTGAACCAGCTGCCAAAGATGAAAATGATACAGTTCCTGCAGCTGAGAACAAATCTTTTGCCGGTAACATTAAAAGTCCTACCACTGACAGGGACAAACTCTTAGCTGAGGCACCTGTATTAGCTTGGGCTCCTTTCCTCCTCAACAACTGGGGTGCACATCGTGATGCTTTAGCTAACCAGAGGGGCTTAGAGGTTGAGGGTCACTGGGGTAGGTTAGACCCAGATGCTGTAATTCCTGCTGAAAAAATTGCAGAGCTCAGTGTTCATTGTACAGTGTACAAGGAACAGGCAGTGGAGATCCCACCATGCCTTGCTCCTCTTAAAAAGGGAGGGCTCTGCCAGAGAAAAGACTTGAGGGTATGCCCTTTCCATGGGCCTATTATACCCCGAGATAATGAAGGAAAACCGATCGATAAAGGTTCTCATGCTGGAGTAGGTGATAGCCAGCCTTCTGAGGAAGTTAATGAACTAAAGAGAAAGGAGCCTCTTAAAGAGTTAACATACCTTAAAACTGAGCAAGCAAACTTTTACGGATCTTATCTTCCAGGCAACGAAGTGGCGGAACAACTTGTGAAACAGGCAACCCAGAATGTGCGTGAGAGAGATAGAAATGAAAAGGCATTGAAACGAGCGAAACTTGCAAAGGTTCGCAAGCACAATGAGGAAGTATTAAGAGATGCTGCAATTGCTTCAACCTCATATTCAGAACTTCTAGCTGAGCATACTGGAGAAGCATTATTGCATGATAGTGGAGCTGTTGAGAAGGCGAAAAAGACAACACTAGCATCGATGTTGAAAAAGAAAGTGACGGCGAAAGACCGAATAGCTGAGAGGCTTTTGAACTCCCGAGCAACAAATACTTCAAGCAGGCAGCTCACACTGGGTGAGGATTCAAAGTATAGAGAAGCATTCCCCAATCAATGGTAGAAAACATAATACTTATATTTTGAAGAGAAGTAGTGGAGGAGCCTAACGACGAACTTCAAGATTTGAACTATTGATCCTGCTGTGTCTATATCAAACTGTTTTTCTCTTCCAGCAGACTAGAGAGTCTGTTGAAACTCCTTCCATCTGTTTATGGTGTAAATTTTGTATCCATCACAATTCCCAAAGCAGTGTGGTTCTATTGGGTTGTCATTTACTTCTTAGAATTTTCAGCAGATTTATGTAATAAATAGAAATTTCATTTAATGATGTGCCTAAACTTTCATTGGCTAGCATAGAAAAAATTATCGATAAAATAATTGTAATATGTTTAATTGGAATGATATAATGAAAAATGAATTTTTTTATAGTAAGGTTG

Network for GWHGAAEX005695

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module8

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF09740.8	DUF2043	395	497	2.40E-24

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0009411	Biological Process	response to UV

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	84.590
SRP064423	SRR2545915	Juvenile tuber	86.510
SRP108465	SRR5643513	five period of Gastrodia elata	30.060
	SRR5643514	five period of Gastrodia elata	25.560
	SRR5643515	five period of Gastrodia elata	29.310
	SRR5643524	five period of Gastrodia elata	26.870
	SRR5643525	five period of Gastrodia elata	30.600
	SRR5643528	five period of Gastrodia elata	30.300
	SRR5643658	five period of Gastrodia elata	37.650
	SRR5643659	five period of Gastrodia elata	23.440
	SRR5643660	five period of Gastrodia elata	26.940
	SRR5643661	five period of Gastrodia elata	24.040
	SRR5643662	five period of Gastrodia elata	26.920
	SRR5643663	five period of Gastrodia elata	28.210
	SRR5643664	five period of Gastrodia elata	37.350
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	29.080
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	27.760
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	19.970
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	36.300
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	16.400
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	20.150
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	19.000
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	15.970
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	14.400
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	9.540
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	17.440
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	17.440
SRP279888	Gastro	Gastrodia elata tuber	39.37
	Juven	Juvenile tuber	30.45
	Mother_Gastro	Mother tuber of Gastrodia elata	49.60
	Mother_Juven	Mother tuber of Juvenile	41.18