Gene detail

Detail information of GWHGAAEX005697/evm.TU.scaffold_17.29

Functional Annotation

Database	Orthologs	E value	Annotation
KOG	KOG2381	3.00E-137	Phosphatidylinositol 4-kinase
nr	gi\|743800436\|ref\|XP_010925937.1\|	7.32E-171	PREDICTED: phosphatidylinositol 4-kinase gamma 4-like [Elaeis guineensis]
Swissprot	tr\|Q9FNF8\|P4KG3_ARATH	8.00E-146	Phosphatidylinositol 4-kinase gamma 3
trEMBL	tr\|M0THI8\|M0THI8_MUSAM	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr7P14510_001}
TAIR	AT2G46500_2	3.00E-137	Unannotated protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000018	784026	786003	+

Transcript Sequence
>GWHTAAEX005697 AAGGTGGGTGCTCATCTTCTTCTTCCATCCAGCATTGAGCTCGATCCGAAGCATTCTGACGCTCTTCTCTCTTTTAGGGAAGATGTCCTCTGCTGGAATCGCCGTCAGCCGGTTCAGGAACGAGCATCCGCATTTTGCGGAGAAGTCGATCCTGATCTATCTCTCCCTTCCGGGCTCATCGGTTCTTCCAATGAGAGTTCTCGACTCCGATTCTATCGCCTCGATCAAACTCCGGATTCAGATCTTGAATGGATCTGTTACCAAGAACCAGGAGCTCGTCTTCGACGGCAGGGAGCTGGCGAGAAACGATTGGCTTGTGCGGGACTACGGATTGTCCGACGGAAACGTCCTTCATCTCGTGATCCGCCGTTCCGATCTCCGATTAATCAAGAATGACAAAGATTTCGTCCAGATCTGCGAGTCTTGGATCGAGCCCCTTATCGTGAACCCCGAGATCGCGCTATCTCCATTCCTGAGGGAACTCATAGGCGAGGCTTATGCTGGGCTCGAGAAAGGAAACAAGCCAGTCTTGTCTTCTGAAGGATCGGGCGGAGTTTACTTTATGAGGGATGAATCGGGTTGCAAGAACGTGGCGGTTTTCAAGCCGATTGATGAGGAACCGATGGCGGAGAACAATCCGCGTGGACTGCCGTTGTCTCTGGATGGGGAAGGGCTCAAAAGGGGGTCGCGTGTTGGGGAAGGGGCGCTGAGGGAGGTTGCGGCTTACATTCTCGACGAATCCGGATTTTCCGGCGTTCCTCCAACTGTCATGGTTCAGTGCTTCTACGGTGGTTTGAAGATTGGATCTCTACAGATGTTTGTTATGAACAGTGGGAGCTGTGAAGACATCGGCCCTCGGTTTTTTCCCGTGGAGGAAGTTCACAAGATTGCTCTTTTGGATCTGAGGCTGGCTAACACAGATCGCCATGCCGGGAACATTTTGATCTGCAGGGAGGGAATAGATGGCAAAATCAAGCTGGTTCCTATCGATCATGGCTACTGCTTACCTGAGAACTTCGAGGATTGCACATTCGACTGGTTGTTCTGGCCCCAAGCCAAGCAGCCTTTCGATTCGAGAAGCTTGGATTACATAAAGCGCCTGGATGCCGAAAAGGACATCGCCCTGCTCAAGTTCTACGGATGGGAGCTGTCTCCGGAGTGCGCACGCGCATTCCGCATCTCCACAGCGCTCTTGAAGAAAGGCACGGAGAAGGGGCTGACACCTTATGATATAGGGAGCATCCTTTGCAGGGAGAATGTCAAGAGGAATTCCAAGATCGAAGAAATAATCTGCAGAGCAAGGGATGCTGTTCTGCCAGGCATCAGTGAGATTGTTTTCTTGGAAGCTATTTCTCATGCCATGGATGATTATCTTGAGAAACTCATCAAATAGATTGGGATGATATCAGTAAAATAGTGTGTAAAAAGAGAGAGAGATAGATAGATTGTCTGTCCTGATGGCCCATTCAGAGAGTGCTAAAGAGAAGGTTTTTGAGATGATATGGAAGTGATCTCTTCTTCTTCTTCTTCTGCCTTTTTTCAGCTCTGTAGAGTAAGTATATAGTTCATTGATTGGGGATAATTTTAGAGCTCAAGTTCTCCAATATTTGTGTATTCTTTTTGCCTTCTTCTTCTTCTTATGATACTGATTTATATCTATGAATGAATGTGATAAAATTCAGTTTTCTTCAGTCTGGAGTTTATGTTGAATTCGACTGTGGTTGTATTCTCATGCAGAATTTATTGCATTAATGATTATAA

Network for GWHGAAEX005697

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module2

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00240.22	ubiquitin	32	96	4.60E-11
PF00454.26	PI3_PI4_kinase	154	383	9.30E-48

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0005515	Molecular Function	protein binding

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	0.040
SRP064423	SRR2545915	Juvenile tuber	0.100
SRP108465	SRR5643513	five period of Gastrodia elata	28.400
	SRR5643514	five period of Gastrodia elata	35.400
	SRR5643515	five period of Gastrodia elata	24.230
	SRR5643524	five period of Gastrodia elata	26.890
	SRR5643525	five period of Gastrodia elata	4.070
	SRR5643528	five period of Gastrodia elata	1.510
	SRR5643658	five period of Gastrodia elata	0.970
	SRR5643659	five period of Gastrodia elata	0.070
	SRR5643660	five period of Gastrodia elata	0.360
	SRR5643661	five period of Gastrodia elata	0.170
	SRR5643662	five period of Gastrodia elata	0.280
	SRR5643663	five period of Gastrodia elata	0.030
	SRR5643664	five period of Gastrodia elata	0.710
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	32.150
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	42.830
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	22.270
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	19.700
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	18.770
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	12.930
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	16.400
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	12.710
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	14.570
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	19.100
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	56.130
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	56.130
SRP279888	Gastro	Gastrodia elata tuber	0.46
	Juven	Juvenile tuber	0.09
	Mother_Gastro	Mother tuber of Gastrodia elata	0.75
	Mother_Juven	Mother tuber of Juvenile	0.17