Detail information of GWHGAAEX005701/evm.TU.scaffold_17.33


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743845315|ref|XP_010938552.1|1.12E-71PREDICTED: uncharacterized protein LOC105057600 [Elaeis guineensis]
trEMBLtr|M0TP11|M0TP11_MUSAM9.00E-62Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr8P09580_001}
TAIRAT4G290705.00E-53Phospholipase A2 family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000018864943870047+
Transcript Sequence

Network for GWHGAAEX005701

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName
GO:0050482Biological Processarachidonic acid secretion
GO:0006644Biological Processphospholipid metabolic process
GO:0004623Molecular Functionphospholipase A2 activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms7.420
SRR2545915Juvenile tuber3.840
SRP108465SRR5643513five period of Gastrodia elata4.290
SRR5643514five period of Gastrodia elata4.660
SRR5643515five period of Gastrodia elata3.990
SRR5643524five period of Gastrodia elata4.060
SRR5643525five period of Gastrodia elata2.680
SRR5643528five period of Gastrodia elata4.880
SRR5643658five period of Gastrodia elata4.330
SRR5643659five period of Gastrodia elata6.720
SRR5643660five period of Gastrodia elata6.770
SRR5643661five period of Gastrodia elata7.360
SRR5643662five period of Gastrodia elata6.420
SRR5643663five period of Gastrodia elata7.810
SRR5643664five period of Gastrodia elata4.780
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_13.200
SRR6049655Rhizomagastrodiae_C368-T10_good_18.690
SRR6049656Rhizomagastrodiae_C368-T07_good_14.430
SRR6049657Rhizomagastrodiae_C368-T07_good_15.430
SRR6049658Rhizomagastrodiae_C368-T04_good_17.850
SRR6049659Rhizomagastrodiae_C368-T04_good_17.270
SRR6049660Rhizomagastrodiae_C368-T01_good_14.900
SRR6049661Rhizomagastrodiae_C368-T04_good_15.020
SRR6049662Rhizomagastrodiae_C368-T01_good_15.270
SRR6049663Rhizomagastrodiae_C368-T01_good_13.710
SRR6049664Rhizomagastrodiae_C368-T10_good_15.210
SRR6049665Rhizomagastrodiae_C368-T10_good_15.210
SRP279888GastroGastrodia elata tuber 7.97
JuvenJuvenile tuber8.67
Mother_GastroMother tuber of Gastrodia elata 10.84
Mother_JuvenMother tuber of Juvenile 11.98