Detail information of GWHGAAEX005705/evm.TU.scaffold_17.37
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| KOG | KOG2183 | 4.00E-154 | Prolylcarboxypeptidase (angiotensinase C) |
| nr | gi|743818188|ref|XP_010931151.1| | 0 | PREDICTED: lysosomal Pro-X carboxypeptidase-like [Elaeis guineensis] |
| Swissprot | tr|Q1PF50|EDA2_ARATH | 1.00E-28 | Probable serine protease EDA2 (Precursor) |
| trEMBL | tr|A0A061F1G9|A0A061F1G9_THECC | 0 | Alpha/beta-Hydrolases superfamily protein isoform 1 {ECO:0000313|EMBL:EOY08369.1} |
| TAIR | AT2G24280 | 4.00E-154 | alpha/beta-Hydrolases superfamily protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000018 | 915975 | 956037 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX005705
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module2 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF05577.11 | Peptidase_S28 | 34 | 463 | 1.00E-76 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K01285 | PRCP | Renin-angiotensin system | map04614 |
| Protein digestion and absorption | map04974 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006508 | Biological Process | proteolysis |
| GO:0008236 | Molecular Function | serine-type peptidase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 1.250 |
| SRR2545915 | Juvenile tuber | 5.980 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 4.970 |
| SRR5643514 | five period of Gastrodia elata | 5.930 | |
| SRR5643515 | five period of Gastrodia elata | 5.130 | |
| SRR5643524 | five period of Gastrodia elata | 4.160 | |
| SRR5643525 | five period of Gastrodia elata | 0.470 | |
| SRR5643528 | five period of Gastrodia elata | 0.160 | |
| SRR5643658 | five period of Gastrodia elata | 0.160 | |
| SRR5643659 | five period of Gastrodia elata | 0.570 | |
| SRR5643660 | five period of Gastrodia elata | 0.050 | |
| SRR5643661 | five period of Gastrodia elata | 2.300 | |
| SRR5643662 | five period of Gastrodia elata | 0.140 | |
| SRR5643663 | five period of Gastrodia elata | 0.630 | |
| SRR5643664 | five period of Gastrodia elata | 0.090 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 26.500 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 50.890 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 23.340 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 14.380 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 8.740 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 5.770 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 5.640 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 4.510 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 8.500 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 6.410 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 49.040 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 49.040 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 3.59 |
| Juven | Juvenile tuber | 5.46 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 3.01 | |
| Mother_Juven | Mother tuber of Juvenile | 3.29 |