Detail information of GWHGAAEX005707/evm.TU.scaffold_17.38


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|672159816|ref|XP_008799673.1|6.80E-66PREDICTED: B3 domain-containing protein Os11g0156000-like [Phoenix dactylifera]
Swissprottr|Q8GYJ2|Y2608_ARATH1.00E-57B3 domain-containing protein At2g36080
trEMBLtr|M0TD03|M0TD03_MUSAM7.00E-59Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr6P35600_001}
TAIRAT5G062503.00E-54AP2/B3-like transcriptional factor family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000018996909999482-
Transcript Sequence

Network for GWHGAAEX005707

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module3

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02362.20B3241279.90E-28
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyB3

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003677Molecular FunctionDNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms5.980
SRR2545915Juvenile tuber18.110
SRP108465SRR5643513five period of Gastrodia elata55.200
SRR5643514five period of Gastrodia elata134.450
SRR5643515five period of Gastrodia elata73.500
SRR5643524five period of Gastrodia elata112.230
SRR5643525five period of Gastrodia elata15.050
SRR5643528five period of Gastrodia elata27.820
SRR5643658five period of Gastrodia elata10.890
SRR5643659five period of Gastrodia elata120.610
SRR5643660five period of Gastrodia elata101.170
SRR5643661five period of Gastrodia elata146.820
SRR5643662five period of Gastrodia elata116.470
SRR5643663five period of Gastrodia elata213.140
SRR5643664five period of Gastrodia elata66.930
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_115.110
SRR6049655Rhizomagastrodiae_C368-T10_good_114.260
SRR6049656Rhizomagastrodiae_C368-T07_good_119.490
SRR6049657Rhizomagastrodiae_C368-T07_good_111.100
SRR6049658Rhizomagastrodiae_C368-T04_good_16.980
SRR6049659Rhizomagastrodiae_C368-T04_good_13.970
SRR6049660Rhizomagastrodiae_C368-T01_good_120.700
SRR6049661Rhizomagastrodiae_C368-T04_good_112.800
SRR6049662Rhizomagastrodiae_C368-T01_good_147.770
SRR6049663Rhizomagastrodiae_C368-T01_good_125.560
SRR6049664Rhizomagastrodiae_C368-T10_good_129.790
SRR6049665Rhizomagastrodiae_C368-T10_good_129.790
SRP279888GastroGastrodia elata tuber 114.70
JuvenJuvenile tuber48.83
Mother_GastroMother tuber of Gastrodia elata 15.48
Mother_JuvenMother tuber of Juvenile 20.70