Detail information of GWHGAAEX005711/evm.TU.scaffold_17.44_evm.TU.scaffold_17.45


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743818060|ref|XP_010931109.1|8.53E-28PREDICTED: uncharacterized protein LOC105052102 [Elaeis guineensis]
trEMBLtr|A0A060D5N2|A0A060D5N2_MAIZE1.00E-24BZIP transcription factor {ECO:0000313|EMBL:AIB04619.1} (Fragment)
TAIRAT1G194904.00E-12Basic-leucine zipper (bZIP) transcription factor family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001812253401228800-
Transcript Sequence

Network for GWHGAAEX005711

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms3.730
SRR2545915Juvenile tuber5.290
SRP108465SRR5643513five period of Gastrodia elata1.630
SRR5643514five period of Gastrodia elata0.710
SRR5643515five period of Gastrodia elata0.990
SRR5643524five period of Gastrodia elata0.980
SRR5643525five period of Gastrodia elata2.120
SRR5643528five period of Gastrodia elata1.190
SRR5643658five period of Gastrodia elata3.240
SRR5643659five period of Gastrodia elata0.370
SRR5643660five period of Gastrodia elata0.400
SRR5643661five period of Gastrodia elata0.760
SRR5643662five period of Gastrodia elata1.000
SRR5643663five period of Gastrodia elata0.570
SRR5643664five period of Gastrodia elata0.600
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_10.730
SRR6049655Rhizomagastrodiae_C368-T10_good_10.170
SRR6049656Rhizomagastrodiae_C368-T07_good_11.280
SRR6049657Rhizomagastrodiae_C368-T07_good_10.990
SRR6049658Rhizomagastrodiae_C368-T04_good_11.180
SRR6049659Rhizomagastrodiae_C368-T04_good_11.610
SRR6049660Rhizomagastrodiae_C368-T01_good_12.260
SRR6049661Rhizomagastrodiae_C368-T04_good_11.870
SRR6049662Rhizomagastrodiae_C368-T01_good_11.740
SRR6049663Rhizomagastrodiae_C368-T01_good_12.610
SRR6049664Rhizomagastrodiae_C368-T10_good_10.880
SRR6049665Rhizomagastrodiae_C368-T10_good_10.880
SRP279888GastroGastrodia elata tuber 1.43
JuvenJuvenile tuber0.57
Mother_GastroMother tuber of Gastrodia elata 4.52
Mother_JuvenMother tuber of Juvenile 1.90