Detail information of GWHGAAEX005717/evm.TU.scaffold_17.54


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|212639349|ref|YP_002315869.1|8.00E-47tRNA delta(2)-isopentenylpyrophosphate transferase [Anoxybacillus flavithermus WK1]
KOGKOG13843.00E-135tRNA delta(2)-isopentenylpyrophosphate transferase
nrgi|672174758|ref|XP_008807488.1|0PREDICTED: tRNA dimethylallyltransferase 2 isoform X1 [Phoenix dactylifera]
Swissprottr|Q9ZUX7|IPT2_ARATH2.00E-135tRNA dimethylallyltransferase 2
trEMBLtr|M0RRM5|M0RRM5_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr11P12450_001}
TAIRAT2G277603.00E-135tRNAisopentenyltransferase 2

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001814134981453138-
Transcript Sequence

Network for GWHGAAEX005717

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01715.16IPPT773705.10E-51
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K00791miaA, TRIT1 Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Zeatin biosynthesismap00908

Gene Ontology

GO term OntologyName
GO:0008033Biological ProcesstRNA processing

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms12.710
SRR2545915Juvenile tuber10.730
SRP108465SRR5643513five period of Gastrodia elata5.720
SRR5643514five period of Gastrodia elata6.530
SRR5643515five period of Gastrodia elata5.510
SRR5643524five period of Gastrodia elata5.880
SRR5643525five period of Gastrodia elata8.390
SRR5643528five period of Gastrodia elata8.310
SRR5643658five period of Gastrodia elata7.700
SRR5643659five period of Gastrodia elata7.070
SRR5643660five period of Gastrodia elata7.030
SRR5643661five period of Gastrodia elata6.350
SRR5643662five period of Gastrodia elata7.460
SRR5643663five period of Gastrodia elata7.500
SRR5643664five period of Gastrodia elata8.450
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_19.610
SRR6049655Rhizomagastrodiae_C368-T10_good_111.290
SRR6049656Rhizomagastrodiae_C368-T07_good_15.700
SRR6049657Rhizomagastrodiae_C368-T07_good_112.210
SRR6049658Rhizomagastrodiae_C368-T04_good_110.380
SRR6049659Rhizomagastrodiae_C368-T04_good_110.960
SRR6049660Rhizomagastrodiae_C368-T01_good_19.680
SRR6049661Rhizomagastrodiae_C368-T04_good_17.560
SRR6049662Rhizomagastrodiae_C368-T01_good_18.270
SRR6049663Rhizomagastrodiae_C368-T01_good_17.320
SRR6049664Rhizomagastrodiae_C368-T10_good_15.370
SRR6049665Rhizomagastrodiae_C368-T10_good_15.370
SRP279888GastroGastrodia elata tuber 8.68
JuvenJuvenile tuber12.95
Mother_GastroMother tuber of Gastrodia elata 5.88
Mother_JuvenMother tuber of Juvenile 9.97