Detail information of GWHGAAEX005719/evm.TU.scaffold_17.56


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743761059|ref|XP_010940336.1|2.53E-131PREDICTED: uncharacterized protein LOC105058946 isoform X1 [Elaeis guineensis]
trEMBLtr|M0T6N1|M0T6N1_MUSAM3.00E-107Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr6P13330_001}
TAIRAT3G224301.00E-40Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001814755491490438+
Transcript Sequence

Network for GWHGAAEX005719

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03468.13XS7098299.90E-20
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0031047Biological Processgene silencing by RNA

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms33.510
SRR2545915Juvenile tuber20.330
SRP108465SRR5643513five period of Gastrodia elata20.670
SRR5643514five period of Gastrodia elata21.740
SRR5643515five period of Gastrodia elata21.850
SRR5643524five period of Gastrodia elata25.010
SRR5643525five period of Gastrodia elata26.460
SRR5643528five period of Gastrodia elata20.960
SRR5643658five period of Gastrodia elata30.650
SRR5643659five period of Gastrodia elata16.970
SRR5643660five period of Gastrodia elata15.370
SRR5643661five period of Gastrodia elata14.440
SRR5643662five period of Gastrodia elata16.010
SRR5643663five period of Gastrodia elata14.650
SRR5643664five period of Gastrodia elata13.950
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_114.330
SRR6049655Rhizomagastrodiae_C368-T10_good_121.430
SRR6049656Rhizomagastrodiae_C368-T07_good_113.100
SRR6049657Rhizomagastrodiae_C368-T07_good_115.490
SRR6049658Rhizomagastrodiae_C368-T04_good_112.800
SRR6049659Rhizomagastrodiae_C368-T04_good_115.460
SRR6049660Rhizomagastrodiae_C368-T01_good_112.510
SRR6049661Rhizomagastrodiae_C368-T04_good_114.380
SRR6049662Rhizomagastrodiae_C368-T01_good_112.760
SRR6049663Rhizomagastrodiae_C368-T01_good_112.050
SRR6049664Rhizomagastrodiae_C368-T10_good_113.390
SRR6049665Rhizomagastrodiae_C368-T10_good_113.390
SRP279888GastroGastrodia elata tuber 12.12
JuvenJuvenile tuber22.51
Mother_GastroMother tuber of Gastrodia elata 26.26
Mother_JuvenMother tuber of Juvenile 26.54