Detail information of GWHGAAEX005723/evm.TU.scaffold_17.66


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|320102538|ref|YP_004178129.1|4.00E-16serine/threonine protein kinase [Isosphaera pallida ATCC 43644]
KOGKOG06103.00E-160Putative serine/threonine protein kinase
nrgi|695034710|ref|XP_009404818.1|0PREDICTED: serine/threonine-protein kinase D6PKL2-like [Musa acuminata subsp. malaccensis]
Swissprottr|Q39183|D6KL2_ARATH3.00E-146Serine/threonine-protein kinase D6PKL2
trEMBLtr|A0A067KEU0|A0A067KEU0_JATCU0Uncharacterized protein {ECO:0000313|EMBL:KDP34711.1}
TAIRAT3G446103.00E-160Protein kinase superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001819713341974025+
Transcript Sequence

Network for GWHGAAEX005723

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00069.24Pkinase692211.20E-33
PF00069.24Pkinase2923954.80E-20
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyAGC_RSK-2

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006468Biological Processprotein phosphorylation
GO:0004672Molecular Functionprotein kinase activity
GO:0005524Molecular FunctionATP binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms3.170
SRR2545915Juvenile tuber2.050
SRP108465SRR5643513five period of Gastrodia elata10.490
SRR5643514five period of Gastrodia elata13.910
SRR5643515five period of Gastrodia elata7.110
SRR5643524five period of Gastrodia elata15.420
SRR5643525five period of Gastrodia elata13.460
SRR5643528five period of Gastrodia elata7.640
SRR5643658five period of Gastrodia elata8.770
SRR5643659five period of Gastrodia elata12.520
SRR5643660five period of Gastrodia elata14.340
SRR5643661five period of Gastrodia elata14.270
SRR5643662five period of Gastrodia elata9.180
SRR5643663five period of Gastrodia elata8.280
SRR5643664five period of Gastrodia elata9.280
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_113.480
SRR6049655Rhizomagastrodiae_C368-T10_good_16.690
SRR6049656Rhizomagastrodiae_C368-T07_good_111.640
SRR6049657Rhizomagastrodiae_C368-T07_good_113.440
SRR6049658Rhizomagastrodiae_C368-T04_good_111.830
SRR6049659Rhizomagastrodiae_C368-T04_good_16.190
SRR6049660Rhizomagastrodiae_C368-T01_good_110.800
SRR6049661Rhizomagastrodiae_C368-T04_good_19.370
SRR6049662Rhizomagastrodiae_C368-T01_good_19.040
SRR6049663Rhizomagastrodiae_C368-T01_good_18.870
SRR6049664Rhizomagastrodiae_C368-T10_good_113.820
SRR6049665Rhizomagastrodiae_C368-T10_good_113.820
SRP279888GastroGastrodia elata tuber 8.41
JuvenJuvenile tuber25.04
Mother_GastroMother tuber of Gastrodia elata 34.22
Mother_JuvenMother tuber of Juvenile 26.97