Detail information of GWHGAAEX005724/evm.TU.scaffold_17.67


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|297622778|ref|YP_003704212.1|3.00E-07heavy metal transport/detoxification protein [Truepera radiovictrix DSM 17093]
KOGKOG16031.00E-34Copper chaperone
nrgi|586750105|ref|XP_006851536.1|1.75E-37hypothetical protein AMTR_s00040p00173680 [Amborella trichopoda]
Swissprottr|Q94BT9|ATOX1_ARATH2.00E-35Copper transport protein ATX1
trEMBLtr|W1PSW7|W1PSW7_AMBTC7.00E-38Uncharacterized protein {ECO:0000313|EMBL:ERN13117.1}
TAIRAT3G562401.00E-34copper chaperone

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001819748011981808-
Transcript Sequence

Network for GWHGAAEX005724

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00403.25HMA4613.30E-18
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K07213ATOX1, ATX1, copZ, golB Mineral absorption map04978

Gene Ontology

GO term OntologyName
GO:0030001Biological Processmetal ion transport
GO:0046872Molecular Functionmetal ion binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms827.700
SRR2545915Juvenile tuber449.800
SRP108465SRR5643513five period of Gastrodia elata1193.310
SRR5643514five period of Gastrodia elata2266.920
SRR5643515five period of Gastrodia elata1326.930
SRR5643524five period of Gastrodia elata2071.100
SRR5643525five period of Gastrodia elata10349.100
SRR5643528five period of Gastrodia elata6713.670
SRR5643658five period of Gastrodia elata17526.100
SRR5643659five period of Gastrodia elata574.930
SRR5643660five period of Gastrodia elata625.100
SRR5643661five period of Gastrodia elata669.400
SRR5643662five period of Gastrodia elata933.960
SRR5643663five period of Gastrodia elata728.270
SRR5643664five period of Gastrodia elata891.910
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1686.000
SRR6049655Rhizomagastrodiae_C368-T10_good_1623.270
SRR6049656Rhizomagastrodiae_C368-T07_good_1862.130
SRR6049657Rhizomagastrodiae_C368-T07_good_1481.520
SRR6049658Rhizomagastrodiae_C368-T04_good_1576.010
SRR6049659Rhizomagastrodiae_C368-T04_good_1580.970
SRR6049660Rhizomagastrodiae_C368-T01_good_1476.840
SRR6049661Rhizomagastrodiae_C368-T04_good_1444.200
SRR6049662Rhizomagastrodiae_C368-T01_good_1925.150
SRR6049663Rhizomagastrodiae_C368-T01_good_1733.580
SRR6049664Rhizomagastrodiae_C368-T10_good_11239.650
SRR6049665Rhizomagastrodiae_C368-T10_good_11239.650
SRP279888GastroGastrodia elata tuber 1,527.50
JuvenJuvenile tuber1,957.05
Mother_GastroMother tuber of Gastrodia elata 8,210.83
Mother_JuvenMother tuber of Juvenile 4,473.59