Detail information of GWHGAAEX005727/evm.TU.scaffold_17.70


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|15613142|ref|NP_241445.1|2.00E-39cytochrome P450 hydroxylase [Bacillus halodurans C-125]
KOGKOG01570Cytochrome P450 CYP4/CYP19/CYP26 subfamilies
nrgi|743874719|ref|XP_010907146.1|0PREDICTED: cytochrome P450 94C1-like [Elaeis guineensis]
Swissprottr|Q9ZUX1|C94C1_ARATH0Cytochrome P450 94C1
trEMBLtr|M5WHI8|M5WHI8_PRUPE0Uncharacterized protein {ECO:0000313|EMBL:EMJ06245.1}
TAIRAT2G276900cytochrome P450, family 94, subfamily C, polypeptide 1

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001820212052022665-
Transcript Sequence

Network for GWHGAAEX005727

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00067.21p450694613.20E-54
Protein Sequence

Gene family

Gene familysubfamily
Cytochrome P450 FamilyCYP94C1

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0055114Biological Processoxidation-reduction process
GO:0016705Molecular Functionoxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0005506Molecular Functioniron ion binding
GO:0020037Molecular Functionheme binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms6.050
SRR2545915Juvenile tuber8.330
SRP108465SRR5643513five period of Gastrodia elata28.890
SRR5643514five period of Gastrodia elata41.060
SRR5643515five period of Gastrodia elata114.350
SRR5643524five period of Gastrodia elata45.830
SRR5643525five period of Gastrodia elata61.240
SRR5643528five period of Gastrodia elata129.930
SRR5643658five period of Gastrodia elata75.060
SRR5643659five period of Gastrodia elata24.310
SRR5643660five period of Gastrodia elata10.220
SRR5643661five period of Gastrodia elata19.220
SRR5643662five period of Gastrodia elata92.940
SRR5643663five period of Gastrodia elata34.600
SRR5643664five period of Gastrodia elata31.270
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_19.610
SRR6049655Rhizomagastrodiae_C368-T10_good_110.220
SRR6049656Rhizomagastrodiae_C368-T07_good_16.780
SRR6049657Rhizomagastrodiae_C368-T07_good_13.840
SRR6049658Rhizomagastrodiae_C368-T04_good_16.460
SRR6049659Rhizomagastrodiae_C368-T04_good_13.750
SRR6049660Rhizomagastrodiae_C368-T01_good_18.150
SRR6049661Rhizomagastrodiae_C368-T04_good_14.930
SRR6049662Rhizomagastrodiae_C368-T01_good_147.720
SRR6049663Rhizomagastrodiae_C368-T01_good_149.630
SRR6049664Rhizomagastrodiae_C368-T10_good_130.510
SRR6049665Rhizomagastrodiae_C368-T10_good_130.510
SRP279888GastroGastrodia elata tuber 8.53
JuvenJuvenile tuber6.49
Mother_GastroMother tuber of Gastrodia elata 624.11
Mother_JuvenMother tuber of Juvenile 396.09