Detail information of GWHGAAEX005734/evm.TU.scaffold_17.80
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| KOG | KOG0752 | 8.00E-147 | Mitochondrial solute carrier protein |
| nr | gi|695042451|ref|XP_009408880.1| | 3.30E-179 | PREDICTED: mitochondrial substrate carrier family protein P-like isoform X2 [Musa acuminata subsp. malaccensis] |
| Swissprot | tr|O04619|ADNT1_ARATH | 2.00E-60 | Mitochondrial adenine nucleotide transporter ADNT1 |
| trEMBL | tr|M0RM19|M0RM19_MUSAM | 2.00E-168 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr10P27950_001} |
| TAIR | AT4G26180 | 8.00E-147 | Mitochondrial substrate carrier family protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000018 | 2496868 | 2508025 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX005734
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module4 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00153.26 | Mito_carr | 27 | 112 | 3.00E-21 |
| PF00153.26 | Mito_carr | 123 | 222 | 7.40E-26 |
| PF00153.26 | Mito_carr | 228 | 320 | 1.60E-20 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0055085 | Biological Process | transmembrane transport |
| GO:0022857 | Molecular Function | transmembrane transporter activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 19.060 |
| SRR2545915 | Juvenile tuber | 19.560 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 10.290 |
| SRR5643514 | five period of Gastrodia elata | 8.570 | |
| SRR5643515 | five period of Gastrodia elata | 10.680 | |
| SRR5643524 | five period of Gastrodia elata | 8.950 | |
| SRR5643525 | five period of Gastrodia elata | 19.480 | |
| SRR5643528 | five period of Gastrodia elata | 46.020 | |
| SRR5643658 | five period of Gastrodia elata | 22.250 | |
| SRR5643659 | five period of Gastrodia elata | 13.490 | |
| SRR5643660 | five period of Gastrodia elata | 13.890 | |
| SRR5643661 | five period of Gastrodia elata | 13.550 | |
| SRR5643662 | five period of Gastrodia elata | 17.590 | |
| SRR5643663 | five period of Gastrodia elata | 13.410 | |
| SRR5643664 | five period of Gastrodia elata | 13.760 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 15.590 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 21.700 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 13.750 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 23.330 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 29.320 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 28.320 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 23.550 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 25.970 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 12.790 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 15.500 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 12.760 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 12.760 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 22.90 |
| Juven | Juvenile tuber | 31.32 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 42.78 | |
| Mother_Juven | Mother tuber of Juvenile | 54.56 |