Detail information of GWHGAAEX005739/evm.TU.scaffold_17.87


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743842841|ref|XP_010937910.1|2.13E-42PREDICTED: uncharacterized protein LOC105057131 [Elaeis guineensis]
Swissprottr|Q700D9|MYBF_ARATH3.00E-25Putative Myb family transcription factor At1g14600
trEMBLtr|B9T7P6|B9T7P6_RICCO1.00E-41Putative uncharacterized protein {ECO:0000313|EMBL:EEF28118.1} (Fragment)
TAIRAT2G402601.00E-31Homeodomain-like superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001828037602805043-
Transcript Sequence

Network for GWHGAAEX005739

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module6

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00249.30Myb_DNA-binding491001.10E-08
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyGARP-G2-like

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003677Molecular FunctionDNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms40.510
SRR2545915Juvenile tuber53.030
SRP108465SRR5643513five period of Gastrodia elata16.440
SRR5643514five period of Gastrodia elata5.030
SRR5643515five period of Gastrodia elata6.250
SRR5643524five period of Gastrodia elata6.520
SRR5643525five period of Gastrodia elata0.250
SRR5643528five period of Gastrodia elata0.000
SRR5643658five period of Gastrodia elata0.190
SRR5643659five period of Gastrodia elata9.310
SRR5643660five period of Gastrodia elata10.680
SRR5643661five period of Gastrodia elata11.090
SRR5643662five period of Gastrodia elata6.740
SRR5643663five period of Gastrodia elata4.170
SRR5643664five period of Gastrodia elata5.410
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_116.790
SRR6049655Rhizomagastrodiae_C368-T10_good_127.840
SRR6049656Rhizomagastrodiae_C368-T07_good_116.380
SRR6049657Rhizomagastrodiae_C368-T07_good_122.920
SRR6049658Rhizomagastrodiae_C368-T04_good_128.260
SRR6049659Rhizomagastrodiae_C368-T04_good_143.060
SRR6049660Rhizomagastrodiae_C368-T01_good_130.680
SRR6049661Rhizomagastrodiae_C368-T04_good_134.860
SRR6049662Rhizomagastrodiae_C368-T01_good_121.520
SRR6049663Rhizomagastrodiae_C368-T01_good_122.970
SRR6049664Rhizomagastrodiae_C368-T10_good_115.720
SRR6049665Rhizomagastrodiae_C368-T10_good_115.720
SRP279888GastroGastrodia elata tuber 11.41
JuvenJuvenile tuber19.69
Mother_GastroMother tuber of Gastrodia elata 16.40
Mother_JuvenMother tuber of Juvenile 15.57