Detail information of GWHGAAEX005743/evm.TU.scaffold_17.93


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|672140835|ref|XP_008794234.1|6.94E-17PREDICTED: zinc finger protein ZAT10-like [Phoenix dactylifera]
trEMBLtr|A0A068UKD0|A0A068UKD0_COFCA6.00E-06Coffea canephora

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001828808812881348+
Transcript Sequence

Network for GWHGAAEX005743

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13912.5zf-C2H2_663883.60E-08
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyC2H2

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003676Molecular Functionnucleic acid binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms3.400
SRR2545915Juvenile tuber6.860
SRP108465SRR5643513five period of Gastrodia elata22.250
SRR5643514five period of Gastrodia elata12.400
SRR5643515five period of Gastrodia elata32.570
SRR5643524five period of Gastrodia elata12.880
SRR5643525five period of Gastrodia elata44.020
SRR5643528five period of Gastrodia elata13.990
SRR5643658five period of Gastrodia elata29.280
SRR5643659five period of Gastrodia elata6.640
SRR5643660five period of Gastrodia elata4.060
SRR5643661five period of Gastrodia elata6.640
SRR5643662five period of Gastrodia elata15.310
SRR5643663five period of Gastrodia elata8.320
SRR5643664five period of Gastrodia elata72.400
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_135.700
SRR6049655Rhizomagastrodiae_C368-T10_good_152.550
SRR6049656Rhizomagastrodiae_C368-T07_good_132.120
SRR6049657Rhizomagastrodiae_C368-T07_good_132.020
SRR6049658Rhizomagastrodiae_C368-T04_good_130.070
SRR6049659Rhizomagastrodiae_C368-T04_good_125.980
SRR6049660Rhizomagastrodiae_C368-T01_good_144.730
SRR6049661Rhizomagastrodiae_C368-T04_good_139.120
SRR6049662Rhizomagastrodiae_C368-T01_good_126.250
SRR6049663Rhizomagastrodiae_C368-T01_good_146.270
SRR6049664Rhizomagastrodiae_C368-T10_good_140.730
SRR6049665Rhizomagastrodiae_C368-T10_good_140.730
SRP279888GastroGastrodia elata tuber 6.00
JuvenJuvenile tuber3.16
Mother_GastroMother tuber of Gastrodia elata 40.97
Mother_JuvenMother tuber of Juvenile 19.15