Detail information of GWHGAAEX005744/evm.TU.scaffold_17.94


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|189502744|ref|YP_001958461.1|3.00E-19hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2]
KOGKOG01920Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs
nrgi|672140829|ref|XP_008794231.1|0PREDICTED: probable serine/threonine-protein kinase drkD [Phoenix dactylifera]
Swissprottr|Q2MHE4|HT1_ARATH1.00E-36Serine/threonine-protein kinase HT1
trEMBLtr|M0TLU2|M0TLU2_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr8P01900_001}
TAIRAT5G585200Protein kinase superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001829210352932613-
Transcript Sequence

Network for GWHGAAEX005744

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module7

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF07714.16Pkinase_Tyr3355691.80E-40
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyTKL-Pl-7

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006468Biological Processprotein phosphorylation
GO:0005524Molecular FunctionATP binding
GO:0004672Molecular Functionprotein kinase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms5.290
SRR2545915Juvenile tuber6.940
SRP108465SRR5643513five period of Gastrodia elata15.990
SRR5643514five period of Gastrodia elata10.780
SRR5643515five period of Gastrodia elata10.440
SRR5643524five period of Gastrodia elata12.340
SRR5643525five period of Gastrodia elata12.680
SRR5643528five period of Gastrodia elata10.120
SRR5643658five period of Gastrodia elata13.170
SRR5643659five period of Gastrodia elata7.690
SRR5643660five period of Gastrodia elata8.630
SRR5643661five period of Gastrodia elata8.250
SRR5643662five period of Gastrodia elata7.510
SRR5643663five period of Gastrodia elata8.460
SRR5643664five period of Gastrodia elata6.270
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_111.520
SRR6049655Rhizomagastrodiae_C368-T10_good_112.410
SRR6049656Rhizomagastrodiae_C368-T07_good_110.810
SRR6049657Rhizomagastrodiae_C368-T07_good_113.690
SRR6049658Rhizomagastrodiae_C368-T04_good_110.720
SRR6049659Rhizomagastrodiae_C368-T04_good_113.570
SRR6049660Rhizomagastrodiae_C368-T01_good_111.800
SRR6049661Rhizomagastrodiae_C368-T04_good_113.480
SRR6049662Rhizomagastrodiae_C368-T01_good_111.200
SRR6049663Rhizomagastrodiae_C368-T01_good_18.400
SRR6049664Rhizomagastrodiae_C368-T10_good_110.570
SRR6049665Rhizomagastrodiae_C368-T10_good_110.570
SRP279888GastroGastrodia elata tuber 6.93
JuvenJuvenile tuber37.18
Mother_GastroMother tuber of Gastrodia elata 12.91
Mother_JuvenMother tuber of Juvenile 29.12