Detail information of GWHGAAEX005747/evm.TU.scaffold_17.97


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|695072510|ref|XP_009383380.1|1.71E-77PREDICTED: protein G1-like7 [Musa acuminata subsp. malaccensis]
Swissprottr|Q9LMK2|LSH6_ARATH1.00E-77Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 6
trEMBLtr|R0I1X5|R0I1X5_9BRAS2.00E-75Uncharacterized protein {ECO:0000313|EMBL:EOA36254.1}
TAIRAT1G070905.00E-77Protein of unknown function (DUF640)

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001830749783076270-
Transcript Sequence

Network for GWHGAAEX005747

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04852.11DUF640211413.70E-63
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms3.820
SRR2545915Juvenile tuber0.850
SRP108465SRR5643513five period of Gastrodia elata4.250
SRR5643514five period of Gastrodia elata4.060
SRR5643515five period of Gastrodia elata2.380
SRR5643524five period of Gastrodia elata2.490
SRR5643525five period of Gastrodia elata12.040
SRR5643528five period of Gastrodia elata4.430
SRR5643658five period of Gastrodia elata3.630
SRR5643659five period of Gastrodia elata4.600
SRR5643660five period of Gastrodia elata3.900
SRR5643661five period of Gastrodia elata4.510
SRR5643662five period of Gastrodia elata2.620
SRR5643663five period of Gastrodia elata4.640
SRR5643664five period of Gastrodia elata3.190
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_16.150
SRR6049655Rhizomagastrodiae_C368-T10_good_18.380
SRR6049656Rhizomagastrodiae_C368-T07_good_15.790
SRR6049657Rhizomagastrodiae_C368-T07_good_14.350
SRR6049658Rhizomagastrodiae_C368-T04_good_13.700
SRR6049659Rhizomagastrodiae_C368-T04_good_13.330
SRR6049660Rhizomagastrodiae_C368-T01_good_14.290
SRR6049661Rhizomagastrodiae_C368-T04_good_12.370
SRR6049662Rhizomagastrodiae_C368-T01_good_13.950
SRR6049663Rhizomagastrodiae_C368-T01_good_14.680
SRR6049664Rhizomagastrodiae_C368-T10_good_15.560
SRR6049665Rhizomagastrodiae_C368-T10_good_15.560
SRP279888GastroGastrodia elata tuber 2.17
JuvenJuvenile tuber2.84
Mother_GastroMother tuber of Gastrodia elata 2.22
Mother_JuvenMother tuber of Juvenile 2.23